From 1d326e7c3236340d4486b8a219ae09e6c8a08d5a Mon Sep 17 00:00:00 2001
From: Thomas Durieux <5577568+tdurieux@users.noreply.github.com>
Date: Sun, 11 Oct 2026 13:13:02 +0200
Subject: [PATCH] fix: repair private repository access from the edit page
 (#892)

* fix: repair private repository access from the edit page

* fix: respect App rollout and reload renamed sources after repair

* fix: gate access repair by status and update response tests
---
 docs/github-app-setup.md            |  8 ++++
 public/asset-manifest.json          |  2 +-
 public/partials/anonymize.htm       |  7 +++
 public/script/app.js                | 33 ++++++++++++++
 public/script/vendor.min.js         | 38 ++++++++--------
 src/server/routes/github-app.ts     |  2 +-
 test/app-reinstall-recovery.test.js |  2 +-
 test/github-app.test.js             | 44 ++++++++++++++++++-
 test/vue-ui.test.js                 | 67 +++++++++++++++++++++++++++++
 9 files changed, 180 insertions(+), 23 deletions(-)

diff --git a/docs/github-app-setup.md b/docs/github-app-setup.md
index daf9599..0aa41e2 100644
--- a/docs/github-app-setup.md
+++ b/docs/github-app-setup.md
@@ -108,6 +108,14 @@ Public reads use a [repository-scoped App user token](https://docs.github.com/en
 Each API request renews through its own repository binding, rechecking identity
 and public visibility while keeping the same user quota.
 Existing installation bindings retain their installation checks.
+
+If a previously public source becomes private, its existing public-only binding
+continues to reject private reads. Select the repository in the App installation,
+then open the anonymization's Edit page and click **Repair GitHub access**. This
+verifies installation access to the same GitHub repository ID and published commit
+before replacing the binding. It preserves the anonymous URL, snapshot and settings.
+Signing in again alone does not change a resource's binding. The Connections page
+also provides **Reconnect read-only access** for this purpose.
 This uses GitHub's documented [public resource access for App user tokens](https://docs.github.com/en/apps/creating-github-apps/registering-a-github-app/choosing-permissions-for-a-github-app).
 
 The explicit **Use existing OAuth access** choice handles repositories not yet
diff --git a/public/asset-manifest.json b/public/asset-manifest.json
index a6bd5da..1c45c44 100644
--- a/public/asset-manifest.json
+++ b/public/asset-manifest.json
@@ -1,6 +1,6 @@
 {
   "core.min.js": "core.3b07189932.min.js",
-  "vendor.min.js": "vendor.c091cfcbfd.min.js",
+  "vendor.min.js": "vendor.0ae693973a.min.js",
   "mermaid.min.js": "mermaid.f848a72d16.min.js",
   "all.min.css": "all.904f999bac.min.css",
   "markdown.min.js": "markdown.44f2e93820.min.js",
diff --git a/public/partials/anonymize.htm b/public/partials/anonymize.htm
index 3322e2d..de40112 100644
--- a/public/partials/anonymize.htm
+++ b/public/partials/anonymize.htm
@@ -119,6 +119,13 @@
               <div class="repo-access-note"><span v-if="detectedType !== 'gist' &amp;&amp; githubConnection !== 'oauth'">Select repositories on GitHub, then return here.</span><span><svg class="ui-icon" aria-hidden="true"><use href="#ui-icon-info"></use></svg> Selected content will be published, including content from private repositories.</span></div>
             </aside>
 
+            <aside class="repo-access-details" v-if="isUpdate &amp;&amp; detectedType === 'repo' &amp;&amp; role === 'owner' &amp;&amp; accessRepairAllowed &amp;&amp; githubConnections?.appEnabled &amp;&amp; githubConnection === 'github-app' &amp;&amp; sourceUrl === 'https://github.com/' + _originalFullName">
+              <p>If this repository became private or its App installation changed, repair its access here. This keeps the same anonymous URL and published commit.</p>
+              <button type="button" class="btn btn-outline-ink" :disabled="repairingGitHubAccess" @click="repairGitHubAccess()">Repair GitHub access</button>
+              <button type="button" class="btn btn-outline-ink" @click="grantGitHubAccess()">Manage access</button>
+              <p v-if="accessRepairMessage" role="status">{{ accessRepairMessage }}</p>
+            </aside>
+
             <aside class="repo-access-details" v-if="isUpdate &amp;&amp; detectedType === 'repo' &amp;&amp; role === 'owner' &amp;&amp; sourceUrl === 'https://github.com/' + _originalFullName">
               <p>If you deleted and recreated this repository, reconnect it before choosing a branch.</p>
               <button type="button" class="btn btn-outline-ink" @click="reconnectSource()">Reconnect source repository</button>
diff --git a/public/script/app.js b/public/script/app.js
index 8f8fe77..eeea77b 100644
--- a/public/script/app.js
+++ b/public/script/app.js
@@ -1404,6 +1404,38 @@ export const anonymizeController = function (state, http, html, params, location
         return null;
       }
 
+      state.accessRepairAllowed = false;
+      state.repairingGitHubAccess = false;
+      state.accessRepairMessage = "";
+      state.repairGitHubAccess = async () => {
+        if (!state.accessRepairAllowed || state.repairingGitHubAccess || !state.githubConnections?.appEnabled || !params.repoId || state.role !== "owner" ||
+            state.githubConnection !== "github-app" || parseRepoFullName(state.sourceUrl) !== state._originalFullName) return;
+        state.repairingGitHubAccess = true;
+        state.accessRepairMessage = "";
+        const request = beginSourceRequest();
+        try {
+          const connections = await http.get("/github/connections");
+          state.githubConnections = connections.data;
+          if (!connections.data.appEnabled) return;
+          const repaired = await http.post("/github/connections/migrate", { type: "repository", id: params.repoId, connection: "github-app" },
+            { headers: { "X-CSRF-Token": connections.data.csrf } });
+          if (!isCurrentSource(request)) return;
+          state.error = null;
+          if (repaired.data.fullName) {
+            state._originalFullName = repaired.data.fullName;
+            state.source.fullName = repaired.data.fullName;
+            state.sourceUrl = "https://github.com/" + repaired.data.fullName;
+          }
+          state.accessRepairMessage = "GitHub access repaired. Your anonymous URL and published commit are unchanged.";
+          await state.urlSelected(true);
+        } catch (_) {
+          if (isCurrentSource(request)) state.accessRepairMessage = "Unable to repair GitHub access. Check the App's repository permissions in Manage access, then retry. Your published snapshot has not been replaced.";
+        } finally {
+          state.repairingGitHubAccess = false;
+          finishSourceRequest(request);
+        }
+      };
+
       state.reconnectingSource = false;
       state.reconnectRepositoryId = undefined;
       state.reconnectSource = async () => {
@@ -1461,6 +1493,7 @@ export const anonymizeController = function (state, http, html, params, location
           state.repoId = params.repoId;
           http.get("/api/repo/" + state.repoId).then(
             async (res) => {
+              state.accessRepairAllowed = !["removed", "archived", "preparing", "queue", "download", "removing", "expiring"].includes(res.data.status);
               state.githubConnection = res.data.connection || "oauth";
               state.sourceUrl = "https://github.com/" + res.data.source.fullName;
               state._originalFullName = res.data.source.fullName;
diff --git a/public/script/vendor.min.js b/public/script/vendor.min.js
index c3b5e89..ea52a13 100644
--- a/public/script/vendor.min.js
+++ b/public/script/vendor.min.js
@@ -1,30 +1,30 @@
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",-1)),!e.sourceUrl&&e.githubConnections?.appEnabled&&e.githubConnections.appConnected&&e.githubConnections.oauthConnected?(l(),d("aside",VC,[o("div",qC,[o("div",MC,[e.detectedType!=="gist"&&e.githubConnection!=="oauth"?(l(),d("button",{key:0,type:"button",class:"btn btn-outline-ink",onClick:t[3]||(t[3]=a=>e.grantGitHubAccess())},[...t[34]||(t[34]=[b("Manage access ",-1),o("svg",{class:"ui-icon","aria-hidden":"true"},[o("use",{href:"#ui-icon-external-link"})],-1)])])):p("v-if",!0),e.isUpdate||e.detectedType==="gist"||e.githubConnection==="oauth"?(l(),d("a",$C,c(e.isUpdate?"Change connection":"Manage connections")+" \u2192",1)):p("v-if",!0)])]),o("div",LC,[e.detectedType!=="gist"&&e.githubConnection!=="oauth"?(l(),d("span",UC,"Select repositories on GitHub, then return here.")):p("v-if",!0),t[35]||(t[35]=o("span",null,[o("svg",{class:"ui-icon","aria-hidden":"true"},[o("use",{href:"#ui-icon-info"})]),b(" Selected content will be published, including content from private repositories.")],-1))])])):p("v-if",!0)])],512),[[K,!e.workspaceOpen&&!e.isUpdate]]),p(" ===== STATE 2: URL provided \u2014 form (left) + preview (right) ===== "),D(o("div",FC,[o("header",zC,[o("div",HC,[o("div",BC,[t[40]||(t[40]=o("a",{href:"/dashboard"},"My work",-1)),t[41]||(t[41]=b(" \xA0/\xA0 ",-1)),o("span",jC,c(e.isUpdate?"Edit anonymization":"New anonymization"),1)]),o("div",GC,[o("h1",WC,[e.isUpdate?p("v-if",!0):(l(),d("span",KC,[...t[42]||(t[42]=[b("New ",-1),o("em",null,"anonymization",-1)])])),e.isUpdate?(l(),d("span",YC,[...t[43]||(t[43]=[b("Edit ",-1),o("em",null,"anonymization",-1)])])):p("v-if",!0)]),D(o("span",{class:A(["type-badge",{"type-repo":e.detectedType==="repo","type-pr":e.detectedType==="pr","type-gist":e.detectedType==="gist"}])},c(e.detectedType==="repo"?"Repo":e.detectedType==="pr"?"PR":"Gist"),3),[[K,e.detectedType]])])])]),e.detectedType==="gist"&&e.gistAppRequired?(l(),d("aside",JC,[t[44]||(t[44]=o("p",null,"Reconnect your GitHub account to read this gist. 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",512),[[K,e.anonymize?.commit?.errors?.pattern||e.anonymize?.commit?.errors?.required]]),D(o("div",q2," This commit no longer exists in the repository. Click refresh to get the latest. 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")])]),o("div",{id:"whatIs",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingWhatIs"},[o("div",{class:"panel-body p-3"},[o("p",null," Anonymous GitHub is a free, open-source tool that anonymizes GitHub repositories and pull requests for double-anonymous (double-blind) peer review. It replaces identifying information \u2014 such as the repository owner, organization name, and custom terms \u2014 so that reviewers cannot determine the identity of the authors through the code repository. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingHowWork"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-general",href:"#howWork","aria-expanded":"false","aria-controls":"howWork"}," How does Anonymous GitHub work? ")])]),o("div",{id:"howWork",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingHowWork"},[o("div",{class:"panel-body p-3"},[o("p",null," Anonymous GitHub either downloads the complete repository and anonymizes the content, or proxies requests to GitHub on the fly. In both cases, the original and anonymized versions of files are cached on the server. The system automatically detects and replaces the repository owner, organization name, and repository name. You can also specify additional custom terms to anonymize using one-per-line regex patterns. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingScope"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-general",href:"#scope","aria-expanded":"false","aria-controls":"scope"}," What is the scope of anonymization? ")])]),o("div",{id:"scope",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingScope"},[o("div",{class:"panel-body p-3"},[o("p",null," In double-anonymous peer review, the boundary of anonymization is the paper plus its online appendix \u2014 not the entire internet. Searching for any part of the paper or the online appendix can be considered a deliberate attempt to break anonymity. Anonymous GitHub anonymizes the repository owner, organization, repository name, file and directory names, and file contents across all text-based file types. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingCost"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-general",href:"#cost","aria-expanded":"false","aria-controls":"cost"}," How much does it cost? 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')])])])])]),p(" Features "),o("h4",{class:"faq-cat"},[o("svg",{class:"ui-icon mr-2","aria-hidden":"true"},[o("use",{href:"#project-icon-filter"})]),b("Features ")]),o("div",{class:"panel-group",id:"faq-features",role:"tablist","aria-multiselectable":"true"},[o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingFormats"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#formats","aria-expanded":"false","aria-controls":"formats"}," Which file formats are supported? ")])]),o("div",{id:"formats",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingFormats"},[o("div",{class:"panel-body p-3"},[o("p",null," Anonymous GitHub can display and render a wide variety of file types: "),o("ul",null,[o("li",null,[o("strong",null,"Text and source code"),b(" \u2014 displayed with syntax highlighting")]),o("li",null,[o("strong",null,"Markdown"),b(" \u2014 rendered as formatted HTML")]),o("li",null,[o("strong",null,"Images"),b(" (PNG, JPG, SVG, etc.) \u2014 displayed inline")]),o("li",null,[o("strong",null,"PDFs"),b(" \u2014 rendered directly in the browser")]),o("li",null,[o("strong",null,"Jupyter Notebooks"),b(" \u2014 rendered with code cells and outputs")])]),o("p",null," Only text-based files are anonymized. Anonymous GitHub analyzes the content of each file to determine whether it is textual or binary. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingPR"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#pullRequests","aria-expanded":"false","aria-controls":"pullRequests"}," Can I anonymize pull requests? ")])]),o("div",{id:"pullRequests",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingPR"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. In addition to full repositories, Anonymous GitHub supports anonymizing individual pull requests. Simply paste the URL of a GitHub pull request when creating a new anonymized repository, and the system will automatically detect that it is a pull request and anonymize it accordingly. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingConference"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#conference","aria-expanded":"false","aria-controls":"conference"}," What is the Conference ID feature? ")])]),o("div",{id:"conference",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingConference"},[o("div",{class:"panel-body p-3"},[o("p",null," When creating an anonymized repository, you can associate it with a Conference ID. This allows conferences to define default anonymization settings (such as expiration dates) that are automatically applied to repositories submitted under that conference. If your conference provides a Conference ID, enter it during the anonymization setup. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingExpiration"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#expiration","aria-expanded":"false","aria-controls":"expiration"}," What happens when an anonymized repository expires? ")])]),o("div",{id:"expiration",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingExpiration"},[o("div",{class:"panel-body p-3"},[o("p",null," You can configure one of three expiration strategies when creating your anonymized repository: "),o("ul",null,[o("li",null,[o("strong",null,"Never expire"),b(" \u2014 the anonymized repository remains accessible indefinitely.")]),o("li",null,[o("strong",null,"Redirect to GitHub"),b(" \u2014 after expiration, visitors are redirected to the original GitHub repository.")]),o("li",null,[o("strong",null,"Remove content"),b(" \u2014 after expiration, the anonymized content is deleted from the server.")])])])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingDownload"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#download","aria-expanded":"false","aria-controls":"download"}," Can I download an anonymized repository? ")])]),o("div",{id:"download",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingDownload"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. Anonymized repositories can be downloaded as a ZIP file. This is useful if reviewers want to build or test the code locally. The downloaded archive contains the fully anonymized version of the repository. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingUpdates"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#updates","aria-expanded":"false","aria-controls":"updates"}," Are updates to the original repository reflected in the anonymized version? ")])]),o("div",{id:"updates",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingUpdates"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. The anonymized repository tracks the source on GitHub: when you push new commits to the original repository, the anonymized view picks up those changes (cached files are refreshed against GitHub). This means you can keep iterating on the code while reviewers have the link, and you do not need to recreate the anonymized repository every time you update the source. "),o("p",null," A few practical implications worth keeping in mind: "),o("ul",null,[o("li",null," You can safely create the anonymized repository early in the writing process \u2014 later commits will be visible to reviewers without any additional action. "),o("li",null," If you rename files, add new identifiers, or introduce new contributor names after creation, revisit the anonymization options (custom terms, file filters) to make sure the new content is still properly anonymized. "),o("li",null," If the original repository is made private or deleted, the anonymized repository will no longer be able to fetch updated content. ")])])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingCLI"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#cli","aria-expanded":"false","aria-controls":"cli"}," Is there a command-line tool? ")])]),o("div",{id:"cli",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingCLI"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. Anonymous GitHub provides a CLI tool that lets you anonymize repositories locally, generating an anonymized ZIP file on your machine. Install it via npm: "),o("pre",{style:{"background-color":"var(--hover-bg-color)",padding:"12px","border-radius":"4px","margin-top":"8px",color:"var(--color)"}},[o("code",null,`npm install -g @tdurieux/anonymous_github
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")])]),o("div",{id:"howWork",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingHowWork"},[o("div",{class:"panel-body p-3"},[o("p",null," Anonymous GitHub either downloads the complete repository and anonymizes the content, or proxies requests to GitHub on the fly. In both cases, the original and anonymized versions of files are cached on the server. The system automatically detects and replaces the repository owner, organization name, and repository name. You can also specify additional custom terms to anonymize using one-per-line regex patterns. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingScope"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-general",href:"#scope","aria-expanded":"false","aria-controls":"scope"}," What is the scope of anonymization? 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')])])])])]),p(" Features "),o("h4",{class:"faq-cat"},[o("svg",{class:"ui-icon mr-2","aria-hidden":"true"},[o("use",{href:"#project-icon-filter"})]),b("Features ")]),o("div",{class:"panel-group",id:"faq-features",role:"tablist","aria-multiselectable":"true"},[o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingFormats"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#formats","aria-expanded":"false","aria-controls":"formats"}," Which file formats are supported? ")])]),o("div",{id:"formats",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingFormats"},[o("div",{class:"panel-body p-3"},[o("p",null," Anonymous GitHub can display and render a wide variety of file types: "),o("ul",null,[o("li",null,[o("strong",null,"Text and source code"),b(" \u2014 displayed with syntax highlighting")]),o("li",null,[o("strong",null,"Markdown"),b(" \u2014 rendered as formatted HTML")]),o("li",null,[o("strong",null,"Images"),b(" (PNG, JPG, SVG, etc.) \u2014 displayed inline")]),o("li",null,[o("strong",null,"PDFs"),b(" \u2014 rendered directly in the browser")]),o("li",null,[o("strong",null,"Jupyter Notebooks"),b(" \u2014 rendered with code cells and outputs")])]),o("p",null," Only text-based files are anonymized. Anonymous GitHub analyzes the content of each file to determine whether it is textual or binary. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingPR"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#pullRequests","aria-expanded":"false","aria-controls":"pullRequests"}," Can I anonymize pull requests? ")])]),o("div",{id:"pullRequests",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingPR"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. In addition to full repositories, Anonymous GitHub supports anonymizing individual pull requests. Simply paste the URL of a GitHub pull request when creating a new anonymized repository, and the system will automatically detect that it is a pull request and anonymize it accordingly. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingConference"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#conference","aria-expanded":"false","aria-controls":"conference"}," What is the Conference ID feature? ")])]),o("div",{id:"conference",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingConference"},[o("div",{class:"panel-body p-3"},[o("p",null," When creating an anonymized repository, you can associate it with a Conference ID. This allows conferences to define default anonymization settings (such as expiration dates) that are automatically applied to repositories submitted under that conference. If your conference provides a Conference ID, enter it during the anonymization setup. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingExpiration"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#expiration","aria-expanded":"false","aria-controls":"expiration"}," What happens when an anonymized repository expires? 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")])]),o("div",{id:"download",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingDownload"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. Anonymized repositories can be downloaded as a ZIP file. This is useful if reviewers want to build or test the code locally. The downloaded archive contains the fully anonymized version of the repository. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingUpdates"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#updates","aria-expanded":"false","aria-controls":"updates"}," Are updates to the original repository reflected in the anonymized version? ")])]),o("div",{id:"updates",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingUpdates"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. The anonymized repository tracks the source on GitHub: when you push new commits to the original repository, the anonymized view picks up those changes (cached files are refreshed against GitHub). This means you can keep iterating on the code while reviewers have the link, and you do not need to recreate the anonymized repository every time you update the source. "),o("p",null," A few practical implications worth keeping in mind: "),o("ul",null,[o("li",null," You can safely create the anonymized repository early in the writing process \u2014 later commits will be visible to reviewers without any additional action. "),o("li",null," If you rename files, add new identifiers, or introduce new contributor names after creation, revisit the anonymization options (custom terms, file filters) to make sure the new content is still properly anonymized. "),o("li",null," If the original repository is made private or deleted, the anonymized repository will no longer be able to fetch updated content. ")])])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingCLI"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-features",href:"#cli","aria-expanded":"false","aria-controls":"cli"}," Is there a command-line tool? ")])]),o("div",{id:"cli",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingCLI"},[o("div",{class:"panel-body p-3"},[o("p",null," Yes. Anonymous GitHub provides a CLI tool that lets you anonymize repositories locally, generating an anonymized ZIP file on your machine. Install it via npm: "),o("pre",{style:{"background-color":"var(--hover-bg-color)",padding:"12px","border-radius":"4px","margin-top":"8px",color:"var(--color)"}},[o("code",null,`npm install -g @tdurieux/anonymous_github
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"),o("li",null," Files larger than 8 MB are not supported. "),o("li",null," Static site generators (such as Jekyll) used with GitHub Pages are not fully supported, although Markdown files are converted to HTML. "),o("li",null," The anonymization of terms within source code may change the behavior of the program (e.g., if a replaced term appears in a string literal or identifier). ")])])])])]),p(" Privacy & Security "),o("h4",{class:"faq-cat"},[o("svg",{class:"ui-icon mr-2","aria-hidden":"true"},[o("use",{href:"#ui-icon-shield"})]),b("Privacy & Security ")]),o("div",{class:"panel-group",id:"faq-privacy",role:"tablist","aria-multiselectable":"true"},[o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingData"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-privacy",href:"#data","aria-expanded":"false","aria-controls":"data"}," How is my data handled? ")])]),o("div",{id:"data",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingData"},[o("div",{class:"panel-body p-3"},[o("p",null," Data stored on Anonymous GitHub is never shared or used for any purpose beyond providing the anonymization service. When a repository is removed or expires, only its configuration is retained \u2014 this makes it easy to restore the repository if needed and ensures that no future repository reuses the same ID. ")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingPermissions"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-privacy",href:"#permissions","aria-expanded":"false","aria-controls":"permissions"}," Why does GitHub say Anonymous GitHub asks for write access? 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It never pushes, modifies, or deletes files on GitHub.")])])]),o("div",{class:"panel panel-default mb-3"},[o("div",{class:"panel-heading p-3",role:"tab",id:"headingViewer"},[o("h3",{class:"panel-title"},[o("a",{class:"collapsed",role:"button","data-toggle":"collapse","data-parent":"#faq-privacy",href:"#viewer","aria-expanded":"false","aria-controls":"viewer"}," Can repository owners see who viewed their anonymized repository? ")])]),o("div",{id:"viewer",class:"panel-collapse collapse",role:"tabpanel","aria-labelledby":"headingViewer"},[o("div",{class:"panel-body p-3"},[o("p",null," No. Only the total number of views is tracked as an incremental counter. It is not possible for the repository owner or for Anonymous GitHub to identify individual viewers. Reviewer anonymity is fully preserved. 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n=ld();Object.defineProperty(n,"invalid",{get(){return Object.values(n.errors).some(Boolean)||Object.keys(n).some(r=>r!=="invalid"&&n[r]&&typeof n[r]=="object"&&n[r].invalid)}}),e[t]=n}return e[t]}var ud={beforeMount(e,{value:t}){e._formState=dd(t,e.name),e.addEventListener("submit",n=>n.preventDefault())}};function t6(e){return e instanceof Date?isNaN(e)?"":`${e.getFullYear()}-${String(e.getMonth()+1).padStart(2,"0")}-${String(e.getDate()).padStart(2,"0")}`:e||""}function ad(e){let t=e._field.binding.value;e.type==="checkbox"?e.checked=!!t:e.type==="radio"?e.checked=t==(e._value??e.value):e._field.timer||(e.value=e.type==="date"?t6(t):t??""),cr(e)}function cr(e){let t=e._field.validation;if(!t)return;let n=e.validity;for(let[r,s]of Object.entries({required:n.valueMissing,pattern:n.patternMismatch,min:n.rangeUnderflow,max:n.rangeOverflow,date:n.badInput,email:n.typeMismatch&&e.type==="email",url:n.typeMismatch&&e.type==="url"}))t.setValidity(r,e.disabled||!s)}var cd={beforeMount(e,{value:t}){var a;let n=t.form&&dd(t.state,t.form),r=n&&e.name?n[a=e.name]||(n[a]=ld()):null;e._field={binding:t,validation:r,timer:null};let s=()=>{clearTimeout(e._field.timer),e._field.timer=null;let u=e._field.binding,f=e.type==="checkbox"?e.checked:e._value??e.value;if(!(e.type==="radio"&&!e.checked)){if((e.type==="number"||e.type==="range")&&(f=e.value===""?null:Number(e.value)),e.type==="date"&&(f=e.value?new Date(e.value+"T00:00:00"):null),r){r.setDirty();for(let w of Object.keys(r.errors))r.setValidity(w,!0)}u.set(f),cr(e),u.change?.()}};e._field.commit=s;let i=u=>{let f=e._field.binding.options?.debounce||0,w=typeof f=="number"?f:f[u.type]??f.default??0;clearTimeout(e._field.timer),w?e._field.timer=setTimeout(s,w):s()};e.addEventListener(e.tagName==="SELECT"||["checkbox","radio","date"].includes(e.type)?"change":"input",i),e.addEventListener("blur",()=>{r&&(r.touched=!0),e._field.timer&&s()})},mounted:ad,updated(e,{value:t}){e._field.binding=t,ad(e)},beforeUnmount(e){clearTimeout(e._field.timer);let{binding:t,validation:n}=e._field,r=t.form&&t.state[t.form];r&&r[e.name]===n&&delete r[e.name]}};function pd(e,t){let n=e.target.closest("form");if(n?._formState&&(n._formState.submitted=!0),n?.querySelectorAll("input, select, textarea").forEach(r=>{r._field?.timer&&r._field.commit(),r._field&&cr(r)}),n&&!n.checkValidity()){let r=n.querySelector(":invalid");r?.scrollIntoView?.({block:"center"}),r?.focus(),n.reportValidity();return}return t()}var fd=Symbol("session"),o6=/^\/(w|api|github)(\/|$)/;function md(e,t={}){let n=e?.split(".").reduce((r,s)=>r?.[s],ur);return n==null&&e?.startsWith("ERRORS.")&&(n=ur.ERRORS.unknown_error),String(n??e??"").replace(/{{\s*([^}]+?)\s*}}/g,(r,s)=>t[s]??"")}var n6={...dr,translate:md};function s6(e){if(e==null||e==="")return e;try{let t=new URL(e,window.location.href);return["http:","https:","mailto:","tel:","blob:"].includes(t.protocol)?e:void 0}catch{return}}function r6(e="#app",t={}){let n=!!document.querySelector('meta[name="review-consent-page"][content="1"]'),r=n&&window.location.pathname==="/review-link"?hr(window):null,s=()=>{let m=r;return r=null,m};!t.history&&window.location.pathname==="/"&&/^#!\/r\/[^/?#]+/.test(window.location.hash)&&window.history.replaceState(window.history.state,"",window.location.hash.slice(2));let i=new Map,a=Jl(t.fetch),u,f;function w(){let m=ct(),E={url(g){return g===void 0?f.currentRoute.value.fullPath:(f.push(g),E)},path(){return f.currentRoute.value.path},search(){return f.currentRoute.value.query}},y=new Proxy({},{get(g,_){let R=f.currentRoute.value.params[_];return Array.isArray(R)?R.join("/"):R}});return{takeReviewHandoff:s,http:a,...m,location:E,params:y,window,promises:Ql,html:{trustAsHtml:g=>g},translate:(g,_)=>Promise.resolve(md(g,_)),quotaService:Xl(a)}}function h(m){return{name:m.template,setup(){let E=rr(ut(fd),i);m.setup(E,w()),Yl(m.template,E);let y=[];return()=>as[m.template](E,y)}}}f=ja({history:t.history||za(),routes:yl.map(m=>m.redirect?m:{path:m.path,component:h(m),meta:{title:m.title,preserveExplorer:m.preserveExplorer}})});let k=la({setup(){u=rr(null,i),u.fmt=n6,u.window=window,u.Math=Math,u.sanitize=g=>DOMPurify.sanitize(g??""),u.highlightRedactions=g=>(u.site_options,Ja(g)),u.submitForm=pd,u.safeUrl=s6;let m=w();Xa(u,m.http,m.location,m.timeout),uo(fd,u),Be(()=>u.title,g=>{document.title=g||"Anonymous GitHub"});let E=[],y=g=>{let _=g.target.closest?.("a[href]");if(g.defaultPrevented||g.button!==0||g.metaKey||g.ctrlKey||g.shiftKey||g.altKey||!_||_.hasAttribute("download")||_.target&&_.target!=="_self"||_.dataset.toggle||_.getAttribute("href").startsWith("#"))return;let T=new URL(_.href,window.location.href);n||/^\/review-link\/?$/i.test(T.pathname)||T.origin!==window.location.origin||o6.test(T.pathname)||(g.preventDefault(),f.push(T.pathname+T.search+T.hash),$("#navbarSupportedContent.show").collapse("hide"))};return document.addEventListener("click",y),co(()=>document.removeEventListener("click",y)),()=>[Kl(u,[]),n?null:ke("header",{class:"app-header"},as["partials/header.htm"](u,E)),ke("main",{class:"app-view align-items-stretch w-100"},ke(sr,null,{default:({Component:g,route:_})=>g?ke(g,{key:_.meta.preserveExplorer?_.matched[0]?.path:_.path}):null})),ke("div",{class:"position-fixed p-3",style:{zIndex:999999999,right:0,bottom:0}},u.toasts.map((g,_)=>ke("div",{class:"toast show",role:"alert","aria-live":"assertive","aria-atomic":"true",key:_},[ke("div",{class:"toast-header"},[ke("strong",{class:"mr-auto"},g.title),ke("button",{type:"button",class:"ml-2 mb-1 close","aria-label":"Close",onClick:()=>u.removeToast(g)},"\xD7")]),ke("div",{class:"toast-body"},g.body)])))]}});for(let[m,E]of Object.entries(nd))k.component(m,E);return k.component("Tree",id),k.component("PartialView",{props:["name","state"],setup(m){let E=[];return()=>as[m.name](m.state,E)}}),k.directive("field",cd),k.directive("form",ud),k.directive("code-editor",sd),k.directive("paper-scrollspy",rd),k.use(f),f.beforeEach(async m=>{if(m.path==="/review-link"&&!n||n&&m.path!=="/review-link")return window.location.assign(m.fullPath),!1;u?.emit("routeLeave"),/^\/(r|repository|anonymize|pull-request-anonymize|gist-anonymize|pr|gist)(\/|$)/.test(m.path)&&await oo("markdown"),/^\/(r|repository)\//.test(m.path)&&await oo("org")}),f.afterEach(m=>{if(!u)return;u.title=m.meta.title,u.emit("routeChange",{title:m.meta.title}),u.emit("routeUpdate",{title:m.meta.title});let E=document.querySelector(".app-view");!m.meta.preserveExplorer&&E&&(E.scrollTop=0)}),k.mount(e),{app:k,router:f,state:u}}document.querySelector("#app")&&(window.anonymousApp=r6());})();
 /*! Bundled license information:
 
 @vue/shared/dist/shared.esm-bundler.js:
diff --git a/src/server/routes/github-app.ts b/src/server/routes/github-app.ts
index 347429c..f095026 100644
--- a/src/server/routes/github-app.ts
+++ b/src/server/routes/github-app.ts
@@ -265,7 +265,7 @@ router.post("/connections/migrate", async (req, res) => {
     const result = isRepo ? await RepositoryModel.updateOne(filter, change) : await PullRequestModel.updateOne(filter, change);
     if (!result.modifiedCount) throw appError("connection_changed", 409);
     await resetOwnerAccessAlerts(user.id, { kind: isRepo ? "repository" : "pull-request", id: String(model._id) });
-    res.json({ connection });
+    res.json({ connection, fullName: selected.fullName || name });
   } catch (error) { handleError(error, res, req); }
 });
 
diff --git a/test/app-reinstall-recovery.test.js b/test/app-reinstall-recovery.test.js
index 55392a9..77f99e4 100644
--- a/test/app-reinstall-recovery.test.js
+++ b/test/app-reinstall-recovery.test.js
@@ -50,7 +50,7 @@ for (const type of ["repository", "pull-request"]) {
       expect(writes).to.have.length(0); expect(model.githubAccess.installationId).to.equal(100);
     });
     it("replaces only the binding while preserving the URL, source and snapshot", async function () {
-      expect(await run()).to.deep.equal({ connection: "github-app" });
+      expect(await run()).to.deep.equal({ connection: "github-app", fullName: "owner/private" });
       expect(writes).to.have.length(1);
       expect(writes[0].update).to.deep.equal({ $set: { githubAccess: selected.binding } });
       expect(writes[0].filter.githubAccess).to.deep.equal(model.githubAccess);
diff --git a/test/github-app.test.js b/test/github-app.test.js
index 635ecaa..d984da1 100644
--- a/test/github-app.test.js
+++ b/test/github-app.test.js
@@ -653,12 +653,54 @@ describeMongo("GitHub App credential and repository integration", function () {
     const body = { type: "repository", id: resource.repoId, connection: "github-app" };
     expect((await request("/github/connections/migrate", { ...body, preview: true })).status).to.equal(200);
     expect((await CachedRepos.findById(cached.id)).name).to.equal("other/old-public");
-    expect((await request("/github/connections/migrate", body)).status).to.equal(200);
+    const repaired = await request("/github/connections/migrate", body);
+    expect(repaired.status).to.equal(200);
+    expect(repaired.data.fullName).to.equal("other/public");
     expect((await Repos.findById(resource.id)).githubAccess.publicRead).to.equal(true);
     expect((await Repos.findById(resource.id)).source.repositoryName).to.equal("other/public");
     expect((await CachedRepos.findById(cached.id)).name).to.equal("other/public");
   });
 
+  for (const permission of ["granted", "missing", "replacement", "missing-commit"]) {
+    it(`repairs a public binding after the source becomes private (${permission})`, async () => {
+      const Repos = require("../src/core/model/anonymizedRepositories/anonymizedRepositories.model").default;
+      await app.saveAppGrant(owner.id, data());
+      const resource = await Repos.create({ repoId: "visibility-" + permission, owner: owner.id, status: "ready",
+        source: { type: "GitHubStream", repositoryName: "owner/repo", commit: "pinned", branch: "main" },
+        options: { terms: ["author"], update: false },
+        githubAccess: { kind: "github-app", repositoryId: 42, publicRead: true, revision: "original" } });
+      const before = resource.toObject();
+      mock(url => {
+        if (url.includes("/user/installations?")) return { installations: [{ id: 4, app_id: 123, account: { id: 10, login: "owner", type: "User" } }] };
+        if (url.includes("/user/installations/4/repositories")) return { repositories: permission === "missing" ? [] : [
+          { id: permission === "replacement" ? 99 : 42, full_name: "owner/repo", private: true, visibility: "private" },
+        ] };
+        if (url.endsWith("/repos/owner/repo") || url.endsWith("/repositories/42")) return { id: 42, full_name: "owner/repo", private: true, visibility: "private" };
+        if (url.endsWith("/app/installations/4")) return { app_id: 123, permissions: { contents: "read", metadata: "read" } };
+        if (url.endsWith("/access_tokens")) return { token: "ghs_private", expires_at: new Date(Date.now() + 3600000).toISOString() };
+        if (url.endsWith("/repos/owner/repo/commits/pinned")) return permission === "missing-commit" ? { status: 404 } : { sha: "pinned" };
+        throw new Error("Unexpected request " + url);
+      });
+      await rejects(app.boundAppToken(owner.id, resource.githubAccess, "owner/repo"), "github_app_access_required");
+      const result = await request("/github/connections/migrate", { type: "repository", id: resource.repoId, connection: "github-app" });
+      const after = await Repos.findById(resource.id);
+      expect(after.repoId).to.equal(before.repoId);
+      expect(after.toObject().source).to.deep.equal(before.source);
+      expect(after.toObject().options).to.deep.equal(before.options);
+      expect(after.status).to.equal("ready");
+      if (permission === "granted") {
+        expect(result.status).to.equal(200);
+        expect(after.githubAccess.publicRead).not.to.equal(true);
+        expect(after.githubAccess.installationId).to.equal(4);
+        expect(after.githubAccess.repositoryId).to.equal(42);
+        expect(await app.boundAppToken(owner.id, after.githubAccess, "owner/repo")).to.equal("ghs_private");
+      } else {
+        expect(result.status).to.equal(403);
+        expect(after.toObject().githubAccess).to.deep.equal(before.githubAccess);
+      }
+    });
+  }
+
   it("recovers a renamed private pull request through its stable repository ID", async () => {
     const PRs = require("../src/core/model/anonymizedPullRequests/anonymizedPullRequests.model").default;
     await app.saveAppGrant(owner.id, data());
diff --git a/test/vue-ui.test.js b/test/vue-ui.test.js
index 93ef44c..cee6f46 100644
--- a/test/vue-ui.test.js
+++ b/test/vue-ui.test.js
@@ -903,6 +903,73 @@ describe("Vue 3 UI", function () {
     });
   }
 
+  for (const scenario of ["success", "failure", "renamed"]) {
+    it(`repairs App access without replacing the source or snapshot (${scenario})`, async function () {
+      const failed = scenario === "failure";
+      const fullName = scenario === "renamed" ? "owner/renamed" : "owner/repo";
+      let repaired = false;
+      const available = value => () => repaired ? value : { __status: 403, body: { error: "github_app_access_required" } };
+      ui = await browser("/anonymize/test", {
+        "/api/user": { username: "owner" },
+        "/github/connections": { csrf: "repair-csrf", appEnabled: true, appConnected: true },
+        "/api/repo/test": { connection: "github-app", role: "owner",
+          source: { fullName: "owner/repo", repositoryID: "saved-record", branch: "main", commit: "saved-sha" },
+          options: { terms: ["author"], update: false, expirationMode: "never" } },
+        "/api/repo/owner/repo/": available({ id: "saved-record", repo: "repo", defaultBranch: "main" }),
+        "/api/repo/owner/repo/branches": available([{ name: "main", commit: "new-sha" }]),
+        "/api/repo/owner/repo/readme": available("readme"),
+        "/github/connections/migrate": async request => {
+          expect(request.headers["X-CSRF-Token"]).to.equal("repair-csrf");
+          expect(request.payload).to.deep.equal({ type: "repository", id: "test", connection: "github-app" });
+          await delay(20);
+          if (failed) return { __status: 403, body: { error: "github_app_access_required" } };
+          repaired = true;
+          return { connection: "github-app", fullName };
+        },
+        "/api/repo/owner/renamed/": { id: "saved-record", repo: "renamed", defaultBranch: "main" },
+        "/api/repo/owner/renamed/branches": [{ name: "main", commit: "new-sha" }],
+        "/api/repo/owner/renamed/readme": "readme",
+      });
+      await delay(60);
+      const button = [...ui.window.document.querySelectorAll("button")].find(b => b.textContent === "Repair GitHub access");
+      expect(button).not.to.equal(undefined);
+      for (let node = button; node; node = node.parentElement) expect(ui.window.getComputedStyle(node).display).not.to.equal("none");
+      button.click(); button.click();
+      await delay(100);
+      expect(ui.requests.filter(r => r.method === "POST")).to.have.length(1);
+      expect(ui.window.document.querySelector("#commit").value).to.equal("saved-sha");
+      expect(ui.requests.some(r => r.url.searchParams.get("reconnect") === "1")).to.equal(false);
+      expect(ui.window.document.body.textContent).to.include(failed ? "Unable to repair GitHub access" : "GitHub access repaired");
+      if (scenario === "renamed") {
+        expect(ui.window.document.querySelector("#sourceUrl").value).to.equal("https://github.com/owner/renamed");
+        const branches = ui.requests.find(r => r.url.pathname === "/api/repo/owner/renamed/branches");
+        expect(branches.url.searchParams.get("anonymizedRepoId")).to.equal("test");
+        expect(ui.window.document.querySelector("#branch").value).to.equal("main");
+      }
+    });
+  }
+
+  it("hides App repair controls when migrations are disabled", async function () {
+    ui = await browser("/anonymize/test", {
+      "/github/connections": { appEnabled: false, appConnected: true },
+      "/api/repo/test": { connection: "github-app", role: "owner",
+        source: { fullName: "owner/repo", branch: "main", commit: "saved-sha" }, options: { terms: [], update: false } },
+    });
+    expect([...ui.window.document.querySelectorAll("button")].some(b => b.textContent === "Repair GitHub access" || b.textContent === "Manage access")).to.equal(false);
+  });
+
+  for (const status of ["removed", "archived", "preparing", "queue", "download", "removing", "expiring", "ready", "error", "expired"]) {
+    it(`gates App access repair for repository status ${status}`, async function () {
+      ui = await browser("/anonymize/test", {
+        "/github/connections": { appEnabled: true, appConnected: true },
+        "/api/repo/test": { status, connection: "github-app", role: "owner",
+          source: { fullName: "owner/repo", branch: "main", commit: "saved-sha" }, options: { terms: [], update: false } },
+      });
+      const shown = [...ui.window.document.querySelectorAll("button")].some(b => b.textContent === "Repair GitHub access");
+      expect(shown).to.equal(["ready", "error", "expired"].includes(status));
+    });
+  }
+
   it("reconnects a recreated source without saving until the owner submits", async function () {
     const oldCommit = "deadbeef";
     const newCommit = "1a212f1deb74b123804ec90d098c0f843c30da5b";