docs: sync to Claude Code v2.1.206 (#151)

* docs: correct stale content for Claude Code v2.1.206

Fix content that no longer matches current Claude Code behavior:

- 04-subagents: remove the /agents creation-wizard instructions
  (wizard removed in v2.1.198); point users to ask Claude or edit
  .claude/agents/ files directly. Explore agent now inherits the
  session model (capped at Opus) instead of Haiku; subagents run in
  the background by default.
- Rename the default permission mode "default" -> "Manual" (v2.1.200)
  across README, CATALOG, INDEX, LEARNING-ROADMAP, resources,
  claude_concepts_guide, and 09-advanced-features, noting that
  "default" still works as an alias.
- README: update the stale "latest v2.1.160" currency claims to v2.1.206.
- Reconcile the contradictory /simplify vs /code-review history:
  they are distinct current skills (/simplify split back out in v2.1.154).

Refresh metadata footers to v2.1.206 / July 11, 2026 and add Claude
Sonnet 5 to Compatible Models on every edited file.

* docs: add Claude Code v2.1.206 feature coverage

Document new features and options that landed through v2.1.206:

- Skills: /dataviz bundled skill, skill stacking (loads all leading
  skills, up to 5), and the ${CLAUDE_PROJECT_DIR} substitution.
- Slash commands: /dataviz row and ${CLAUDE_PROJECT_DIR} mention.
- Subagents already covered in the correctness commit; CLI adds
  --append-subagent-system-prompt, CLAUDE_ENABLE_STREAM_WATCHDOG,
  a Claude Sonnet 5 model row (new default, 1M context), and the
  /model "Org default" note.
- MCP: roots/list working-directory discovery and the untrusted-
  workspace pending-approval behavior for self-approved .mcp.json.
- Hooks: agent_needs_input / agent_completed Notification values and
  the prompt_id input field.
- Plugins: marketplace renames / displayName / defaultEnabled fields.
- Checkpoints: "Summarize up to here" backward targeted compaction.

Refresh metadata footers to v2.1.206 / July 11, 2026 and add Claude
Sonnet 5 to Compatible Models on every edited file.

* docs: qualify Sonnet 5 default scope and reconcile bundled-skills list

- Sonnet 5 default is tier-dependent (Pro/Team seats); Opus 4.8 remains
  default on Max/Team Premium/Enterprise PAYG/API — was overstated as
  the flat default.
- Add missing /simplify row to the bundled-skills table (it was already
  referenced as a distinct skill in the /code-review row) and drop the
  hard skill count in favor of pointing at the commands reference.

resources.md

@@ -239,7 +239,7 @@ These steps capture the core recommendations for smooth workflows with Claude Co
 | **Web Sessions** | Access Claude Code through browser-based interfaces for remote development | [CLI Reference](10-cli/) |
 | **Desktop App** | Native desktop application for Claude Code with enhanced UI | [Claude Code Docs](https://code.claude.com/docs/en/desktop) |
 | **Extended Thinking** | Deep reasoning toggle via `Alt+T`/`Option+T` or `MAX_THINKING_TOKENS` env var | [Advanced Features](09-advanced-features/) |
-| **Permission Modes** | Fine-grained control: default, acceptEdits, plan, auto, dontAsk, bypassPermissions | [Advanced Features](09-advanced-features/) |
+| **Permission Modes** | Fine-grained control: manual (formerly default), acceptEdits, plan, auto, dontAsk, bypassPermissions | [Advanced Features](09-advanced-features/) |
 | **7-Tier Memory** | Managed Policy, Project, Project Rules, User, User Rules, Local, Auto Memory | [Memory Guide](02-memory/) |
 | **Hook Events** | 29 events: PreToolUse, PostToolUse, PostToolUseFailure, Stop, StopFailure, SubagentStart, SubagentStop, Notification, Elicitation, and more | [Hooks Guide](06-hooks/) |
 | **Agent Teams** | Coordinate multiple agents working together on complex tasks | [Subagents Guide](04-subagents/) |
@@ -252,12 +252,13 @@ These steps capture the core recommendations for smooth workflows with Claude Co
 | **/run, /verify, /run-skill-generator** | Bundled skills to launch your project, confirm a fix works, and generate per-project run/verify skills (v2.1.145+) | [Skills Guide](03-skills/) |
 
 ---
-**Last Updated**: June 2, 2026
-**Claude Code Version**: 2.1.160
+**Last Updated**: July 11, 2026
+**Claude Code Version**: 2.1.206
 **Sources**:
 - https://code.claude.com/docs/en/overview
 - https://code.claude.com/docs/en/changelog
 - https://code.claude.com/docs/en/agent-view
+- https://code.claude.com/docs/en/permission-modes
 - https://github.com/anthropics/claude-code/releases/tag/v2.1.144
 - https://github.com/anthropics/claude-code/releases/tag/v2.1.145
-**Compatible Models**: Claude Sonnet 4.6, Claude Opus 4.8, Claude Haiku 4.5
+**Compatible Models**: Claude Sonnet 5, Claude Sonnet 4.6, Claude Opus 4.8, Claude Haiku 4.5