diff --git a/erpnext/stock/doctype/pick_list/pick_list.py b/erpnext/stock/doctype/pick_list/pick_list.py
index a4a335d2c5c..f82c53bd14f 100644
--- a/erpnext/stock/doctype/pick_list/pick_list.py
+++ b/erpnext/stock/doctype/pick_list/pick_list.py
@@ -383,7 +383,7 @@ class PickList(TransactionBase):
 		picked_items = get_picked_items_qty(packed_items, contains_packed_items=True)
 		self.validate_picked_qty(picked_items)
 
-		doc_updates = {}
+		doc_updates = {item: {"picked_qty": 0} for item in set(packed_items)}
 		for d in picked_items:
 			doc_updates[d.product_bundle_item] = {"picked_qty": flt(d.picked_qty)}
 
@@ -394,7 +394,7 @@ class PickList(TransactionBase):
 		picked_items = get_picked_items_qty(so_items)
 		self.validate_picked_qty(picked_items)
 
-		doc_updates = {}
+		doc_updates = {item: {"picked_qty": 0} for item in set(so_items)}
 		for d in picked_items:
 			doc_updates[d.sales_order_item] = {"picked_qty": flt(d.picked_qty)}