diff --git a/scripts/gen-llms-txt.ts b/scripts/gen-llms-txt.ts
index 02e55d12d..3295f36ff 100644
--- a/scripts/gen-llms-txt.ts
+++ b/scripts/gen-llms-txt.ts
@@ -19,6 +19,7 @@
 
 import * as fs from 'fs';
 import * as path from 'path';
+import { mkdirpSync } from '../lib/fs-utils';
 import { discoverTemplates } from './discover-skills';
 import { COMMAND_DESCRIPTIONS as BROWSE_COMMANDS } from '../browse/src/commands';
 
@@ -224,7 +225,7 @@ export async function generateLlmsTxt(opts: GenerateOptions = {}): Promise<Gener
 export async function writeLlmsTxt(opts: GenerateOptions & { outputPath?: string } = {}): Promise<GenerateResult> {
   const result = await generateLlmsTxt(opts);
   const outputPath = opts.outputPath ?? OUTPUT;
-  fs.mkdirSync(path.dirname(outputPath), { recursive: true });
+  mkdirpSync(path.dirname(outputPath));
   fs.writeFileSync(outputPath, result.content, { encoding: 'utf-8' });
   return result;
 }
diff --git a/scripts/gen-skill-docs.ts b/scripts/gen-skill-docs.ts
index 57e0e82ed..f2628367d 100644
--- a/scripts/gen-skill-docs.ts
+++ b/scripts/gen-skill-docs.ts
@@ -29,6 +29,7 @@ import type { HostConfig } from './host-config';
 const ROOT = path.resolve(import.meta.dir, '..');
 import { ALL_MODEL_NAMES, resolveModel, type Model } from './models';
 import { resolveStateRoot } from '../lib/state-root';
+import { mkdirpSync } from '../lib/fs-utils';
 
 type HostArg = Host | 'all';
 
@@ -967,7 +968,7 @@ export async function runGeneration(settings: GenerationOptions = {}): Promise<G
           log(`FRESH: ${relativePath}`);
         }
       } else {
-        fs.mkdirSync(path.dirname(outputPath), { recursive: true });
+        mkdirpSync(path.dirname(outputPath));
         fs.writeFileSync(outputPath, content);
         log(`GENERATED: ${relativePath}`);
       }
diff --git a/test/generator-eexist.test.ts b/test/generator-eexist.test.ts
new file mode 100644
index 000000000..28f6446e9
--- /dev/null
+++ b/test/generator-eexist.test.ts
@@ -0,0 +1,38 @@
+/**
+ * #2329: Bun on Windows throws EEXIST from mkdirSync(dir, { recursive: true })
+ * when dir already exists, so a second `gen:skill-docs` (or llms.txt write)
+ * crashed. Both generators now use lib/fs-utils' mkdirpSync. Emulated on every
+ * platform with the same --preload fixture as test/fs-utils.test.ts (#2635).
+ */
+import { afterAll, describe, expect, test } from 'bun:test';
+import { spawnSync } from 'child_process';
+import * as fs from 'fs';
+import * as os from 'os';
+import * as path from 'path';
+
+const ROOT = path.resolve(import.meta.dir, '..');
+const PRELOAD = path.join(import.meta.dir, 'helpers', 'emulate-bun-windows-eexist.ts');
+const tmp = fs.mkdtempSync(path.join(os.tmpdir(), 'gstack-gen-eexist-'));
+afterAll(() => fs.rmSync(tmp, { recursive: true, force: true }));
+
+const bun = (...args: string[]) => spawnSync(process.execPath, ['--preload', PRELOAD, ...args], { cwd: ROOT, encoding: 'utf8', timeout: 120_000 });
+
+describe('#2329: generators tolerate existing output directories under Windows EEXIST semantics', () => {
+  test('gen-skill-docs renders twice into the same out-dir', () => {
+    const out = path.join(tmp, 'render');
+    for (let run = 1; run <= 2; run++) {
+      const r = bun('scripts/gen-skill-docs.ts', '--host', 'codex', '--out-dir', out);
+      expect(`run ${run}: exit ${r.status}`, r.stderr).toBe(`run ${run}: exit 0`);
+      expect(r.stderr).not.toContain('EEXIST');
+    }
+    expect(fs.existsSync(path.join(out, '.agents', 'skills', 'gstack-review', 'SKILL.md'))).toBe(true);
+  });
+
+  test('writeLlmsTxt writes into an existing directory', () => {
+    const target = path.join(tmp, 'llms', 'llms.txt');
+    fs.mkdirSync(path.dirname(target), { recursive: true });
+    const r = bun('-e', `const { writeLlmsTxt } = await import(${JSON.stringify(path.join(ROOT, 'scripts/gen-llms-txt.ts'))}); await writeLlmsTxt({ outputPath: ${JSON.stringify(target)} });`);
+    expect(r.status, r.stderr).toBe(0);
+    expect(fs.readFileSync(target, 'utf8')).toContain('gstack');
+  });
+});