fix(cso): count remainingSeconds to the investigation deadline; bound and validate the tool timeline

remainingSeconds now measures to deadline - 60s, the point where scan,
verify and record-review refuse with DEADLINE, and inspect carries it.
The post-command clock lookup can only omit the field, never fail a
command whose state change is already saved. The stream timeline records
end times from tool_result, indexes only recorded calls so it stays at
the 4096 cap, and receipts reject malformed timeline entries.

test/cso-cli.test.ts

@@ -69,7 +69,17 @@ describe('compiled CSO command workflow',()=>{
     runGit('init','-q');runGit('config','user.email','fixture@example.test');runGit('config','user.name','Fixture');fs.writeFileSync(path.join(planRepo,'package.json'),JSON.stringify({name:'sensitive-plan',version:'1.0.0',scripts:{start:'node app.js',test:'node --test'}}));fs.writeFileSync(path.join(planRepo,'package-lock.json'),JSON.stringify({name:'sensitive-plan',version:'1.0.0',lockfileVersion:3,packages:{'':{name:'sensitive-plan',version:'1.0.0'}}}));fs.writeFileSync(path.join(planRepo,'app.js'),'export const app = true\n');fs.writeFileSync(path.join(planRepo,testPath),'const test=require("node:test");test("control",()=>{})\n');runGit('add','.');runGit('commit','-qm','sensitive test path');
     const started=command(['start','--repo',planRepo,'--comprehensive','--offline']);expect(started.status).toBe(0);const run=JSON.parse(started.stdout),planned=command(['runtime-plan',run.runId,'node','--port','3456']);expect(planned.status).toBe(0);const plan=JSON.parse(planned.stdout),serialized=JSON.stringify(plan);
     expect(serialized).not.toContain(wallet);const testHandle=plan.tests.files.find((value:string)=>value.startsWith('@cso-path//'));expect(testHandle).toMatch(/^@cso-path\/\/[a-f0-9]{32}$/);expect(plan.tests.commands[0].args).toContain(`./${testHandle}`);expect(plan.start.command).toEqual({executable:'/usr/local/bin/node',args:['app.js']});
-    const budget=(Date.parse(run.deadline)-Date.parse(run.createdAt))/1000;for(const remaining of [run.remainingSeconds,plan.remainingSeconds]){expect(Number.isSafeInteger(remaining)).toBe(true);expect(remaining).toBeGreaterThan(budget-120);expect(remaining).toBeLessThanOrEqual(budget);}expect(plan.remainingSeconds).toBeLessThanOrEqual(run.remainingSeconds);
+    const budget=(Date.parse(run.deadline)-Date.parse(run.createdAt))/1000;for(const remaining of [run.remainingSeconds,plan.remainingSeconds]){expect(Number.isSafeInteger(remaining)).toBe(true);expect(remaining).toBeGreaterThan(budget-120);expect(remaining).toBeLessThanOrEqual(budget-60);}expect(plan.remainingSeconds).toBeLessThanOrEqual(run.remainingSeconds);
+  });
+  test('run clock counts to the investigation deadline: zero in the reporting minute, which still accepts submit until the audit deadline',()=>{
+    const started=command(['start','--repo',repo,'--scope','auth','--offline']);expect(started.status).toBe(0);const run=JSON.parse(started.stdout),reportPath=path.join(state,'security','cso',run.repoId,run.runId,'report.json'),input=path.join(root,`clock-${run.runId}.json`);fs.writeFileSync(input,'{}');
+    const submitted=command(['submit',run.runId,input]);expect(submitted.status).toBe(0);const inspected=command(['inspect',run.runId]);expect(inspected.status).toBe(0);
+    for(const remaining of [JSON.parse(submitted.stdout).remainingSeconds,JSON.parse(inspected.stdout).remainingSeconds]){expect(Number.isSafeInteger(remaining)).toBe(true);expect(remaining).toBeGreaterThan(0);expect(remaining).toBeLessThanOrEqual(run.remainingSeconds);}
+    const report=JSON.parse(fs.readFileSync(reportPath,'utf8'));report.deadline=new Date(Date.now()+30_000).toISOString();fs.writeFileSync(reportPath,JSON.stringify(report,null,2)+'\n');
+    const late=command(['inspect',run.runId]);expect(late.status).toBe(0);expect(JSON.parse(late.stdout).remainingSeconds).toBe(0);
+    const reporting=command(['submit',run.runId,input]);expect(reporting.status).toBe(0);expect(JSON.parse(reporting.stdout).remainingSeconds).toBe(0);
+    report.deadline=new Date(Date.now()-1_000).toISOString();fs.writeFileSync(reportPath,JSON.stringify({...JSON.parse(fs.readFileSync(reportPath,'utf8')),deadline:report.deadline},null,2)+'\n');
+    const refused=command(['submit',run.runId,input]);expect(refused.status).not.toBe(0);expect(refused.stderr).toContain('DEADLINE');expect(refused.stdout).toBe('');
   });
   test('wallet-shaped helper finding IDs survive submit, review, and verification admission',()=>{const started=command(['start','--repo',repo,'--comprehensive','--offline']);expect(started.status).toBe(0);const run=JSON.parse(started.stdout),base:any={title:'Wallet-shaped helper ID',rootCause:'Tenant query omits caller tenant predicate 0',location:{path:'src/users.ts',line:1,symbol:'tenantQuery'},advisoryIds:[],severity:'high',confidence:'high',confidenceRationale:'Caller-to-sink trace directly establishes the missing predicate',evidence:'supported',attackerControl:'Tenant chooses the record ID',impact:'Cross-tenant record disclosure',scenario:'A tenant requests another tenant record by ID',trace:['route','tenantQuery','database'],references:['src/users.ts:1'],recommendation:'Bind the query to the authenticated tenant',challenge:{reviewer:'reviewer-session',independent:true,mode:'independent_agent',callers:'route caller checked',controls:'authentication lacks authorization',counterevidence:'none found',conclusion:'tenant predicate is absent'}};let helperId='';for(let i=0;i<10_000;i++){base.rootCause=`Tenant query omits caller tenant predicate ${i}`;helperId=fingerprint(base);if(redact(helperId)!==helperId)break;}expect(redact(helperId)).not.toBe(helperId);const input=path.join(root,`wallet-id-${run.runId}.json`);fs.writeFileSync(input,JSON.stringify({findings:[base]}));expect(command(['submit',run.runId,input]).status).toBe(0);const reportPath=path.join(state,'security','cso',run.repoId,run.runId,'report.json'),stored=JSON.parse(fs.readFileSync(reportPath,'utf8'));expect(stored.findings[0].id).toBe(helperId);const before=fs.readFileSync(path.join(repo,'src','users.ts'),'utf8'),request:any={findingId:helperId,runtimeProfile:'node-v1',port:3456,start:{executable:'/usr/local/bin/node',args:['src/users.ts']},legitimate:[{name:'control',path:'/health',method:'GET',expected:{status:200}}],security:{name:'tenant boundary',path:'/users/other',method:'GET',expected:{status:403},vulnerable:{status:200}},existingTests:[{executable:'/usr/local/bin/node',args:['--test']}],testFiles:['src/control.test.ts'],fixtures:{},boundaryFiles:['src/users.ts'],changes:[{path:'src/users.ts',beforeSha256:sha256(before),after:before+'// tenant predicate\n',effect:'source'}],review:{reviewer:'reviewer-session',independent:true,rootCauseRepaired:true,featurePreserved:true,boundaryMocks:false,rationale:'The tenant predicate is added while the control remains intact',reviewedPatchHash:''}};request.review.reviewedPatchHash=patchHash(request);fs.writeFileSync(input,JSON.stringify(request));const reviewed=command(['record-review',run.runId,input,'--producer','producer-session']);expect(reviewed.status).toBe(0);request.review.artifactId=JSON.parse(reviewed.stdout).reviewArtifactId;fs.writeFileSync(input,JSON.stringify(request));const verified=command(['verify',run.runId,input]);expect(verified.status).not.toBe(0);expect(verified.stderr).toContain('PREREQUISITE');expect(verified.stderr).not.toContain('REDACTION_FAILED');const review=JSON.parse(fs.readFileSync(path.join(path.dirname(reportPath),'reviews',`${request.review.artifactId}.json`),'utf8'));expect(review.findingId).toBe(helperId);});
   test('daily find, early submit, and finish persist a truthful report without changing source',()=>{const before=git('status','--porcelain=v1','-z'),started=command(['start','--repo',repo,'--scope','auth','--offline']);expect(started.status).toBe(0);const run=JSON.parse(started.stdout),runId=run.runId;expect(run.completeness).toBe('not assessed');const reportPath=path.join(state,'security','cso',run.repoId,runId,'report.json');expect(fs.existsSync(reportPath)).toBe(true);const current=JSON.parse(fs.readFileSync(reportPath,'utf8'));