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94993f74012782fd94416dd44b8314f6363a13a4
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Author SHA1 Message Date
Garry TanGitHubClaude Fable 5Jayesh BetalaMichael Vann
 		94993f7401 v1.61.0.0 fix wave: guards failing open / silent failures (9 fixes, 4 community PRs absorbed) (#2472) 
* fix(careful): warn on chained rm even when the last target is safe

The safe-exception block whitelisted rm -rf of build artifacts by
extracting targets with a single greedy match (.*rm ...), which only ever
inspects the LAST rm in the command. A chain like 'rm -rf /; rm -rf
node_modules' was therefore judged solely by its trailing safe target and
allowed without warning, waving through the destructive 'rm -rf /'.

Gate the shortcut to single rm invocations: when any shell separator
(; | & newline, incl. JSON-escaped \n/\r from the grep extraction path)
is present, fall through to the destructive-pattern check, which warns on
any recursive rm. Single-command artifact cleanups still allow.

Adds 3 regression tests covering semicolon and && chains in both orders.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* harden(careful): substitution separators + capital -R recursive flag (#2039)

Two residual fail-opens in the same guard PR #2040 hardened, both verified
by executing the script pre-fix:

- rm -rf $(./wipe-all)/node_modules silently allowed: the substitution token
  ends in a whitelisted suffix and the safe-exception early exit skipped ALL
  downstream checks. $( and backtick now count as chain separators; plain
  $VAR expansion stays allowed.
- rm -R / silently allowed: both greps required a lowercase r in the flag
  cluster; capital -R is the documented BSD/macOS recursive flag. Both greps
  now match -[a-zA-Z]*[rR].

Six new tests: substitution x2 -> ask, capital-R x2 -> ask, rm -Rf
node_modules single-command -> still allowed, escaped-newline branch
(existing code, previously untested), and a pinned deliberate FP
(cd app && rm -rf node_modules -> ask) documenting the fail-closed
direction on chains.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(context-restore): prefer the current branch's own checkpoint (#2052)

All worktrees of a repo share one origin-derived slug, so they share one
`~/.gstack/projects/<slug>/checkpoints/` dir. `/context-restore` loaded the
newest checkpoint across the whole dir, so in one worktree it could silently
restore a *sibling worktree's* newer checkpoint.

Step 1 now orders candidates current-branch-first (read from each file's
`branch:` frontmatter), keeping other branches as a fallback. A branch is
checked out in at most one worktree, so this stops cross-worktree contamination
while preserving Conductor cross-branch handoff: when the current branch has no
checkpoint of its own, the full newest-first set is still used.

- scan the 200 newest before partitioning so a current-branch checkpoint sitting
  below a burst of sibling saves is still found; output still capped at 20
- non-git / detached HEAD / branchless legacy saves fall back to the old
  newest-first behavior (back-compat)
- +5 regression tests in context-save-hardening.test.ts (the #2052 bug case
  fails on the old pipeline); regenerated SKILL.md + proactive-suggestions.json

Fixes #2052

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* fix(gbrain): pass --confirm-destructive on drift re-register (#1985)

ensureSourceRegistered() handles match-but-different-path by removing the
old source then re-adding it at the new path. The remove was issued as
`gbrain sources remove <id> --yes`, but gbrain >= 0.42 gates `sources
remove` behind `--confirm-destructive` (`--yes` alone no longer suppresses
the data-loss prompt). The remove therefore fails with "To proceed, pass
--confirm-destructive", which ensureSourceRegistered surfaces as "source
registration failed" — aborting the entire /sync-gbrain code stage for any
already-registered source whose path has drifted. The memory and brain-sync
stages still pass, so the code index silently stops refreshing.

The orchestrator's own safeSourcesRemove() already passes
--confirm-destructive; this brings the lib helper in line with that
convention. Keeps --yes for older gbrain.

Tests: extend the fake gbrain shim in gbrain-sources.test.ts to simulate
the gbrain >= 0.42 guard (remove without --confirm-destructive exits 1),
update the drift re-register assertion, and add a regression test that
proves the drift path no longer throws. Both fail on main with the exact
"To proceed, pass --confirm-destructive" error and pass with the fix.

Fixes #1985

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* harden(gbrain-sources): route drift remove through #1734 guards + realpath drift check

Absorbing #2031 un-blocked a destructive remove that bypassed the #1734
data-loss guards: ensureSourceRegistered's drift path issued
`gbrain sources remove` directly, without the detectAutopilot +
decideSourceRemove checks every other remove routes through via
safeSourcesRemove. gbrain >= 0.42's own prompt was accidentally blocking
that path; with --confirm-destructive passed it is live again.

- Drift remove now refuses LOUDLY (throws, actionable message) while an
  autopilot is active or when decideSourceRemove disallows; a silent
  changed=false would hide the drifted registration.
- decideSourceRemove's extraArgs (--keep-storage when supported) propagate
  to the remove call, matching safeSourcesRemove.
- Drift is realpath-normalized before being declared: a symlink alias of the
  same directory (macOS /tmp -> /private/tmp) is a match, not drift — the
  probable cause of #1985's reporter hitting the remove on an unmoved repo.
- Drift fires a loud stderr line (old -> new path); perpetual drift in logs
  is the trigger for promoting #1985's reindex-in-place design.

Tests: autopilot-active refusal (no remove in call log), fail-closed refusal
on unreadable sources list, --keep-storage propagation, symlink-alias
no-drift; existing drift tests pin the guard probes so a live autopilot on
the dev machine can't flip them.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(developer-profile): exclude mode:resources rows from SESSION_COUNT, TIER, NUDGE_ELIGIBLE (#2067)

Every /office-hours run appends a mode:"resources" bookkeeping row alongside
the real session row, so --read double-counted sessions (~2x): tiers promoted
early and the builder-to-founder nudge armed prematurely. The file already
filtered resources rows for LAST_*/CROSS_PROJECT; the same realSessions
filter now feeds SESSION_COUNT/TIER, and the nudge predicate is the faithful
allowlist (mode === 'builder') so a future mode #4 fails closed instead of
re-opening this bug.

8 regression tests: count vs resources noise, tier boundaries both sides,
nudge false-with-noise / true-at-3-builders, cross-project trailing row.

Absorbed from PR #1991 by @mvann (fix + tests commits; the PR's version-bump
commit is superseded by this wave's consolidated release commit).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(hooks): passThrough() two-branch contract — never emit permissionDecision:'defer' (#2035, #2006)

Every AskUserQuestion died with "Tool result missing due to internal error"
on current Claude Code builds (Desktop 1.14271.0, CC 2.1.177). Root cause:
the question-preference-hook emitted permissionDecision:'defer' on every
pass-through path. 'defer' is a real PreToolUse value, but since CC v2.1.89
its semantics are "pause this tool call for external resumption" (headless
resume) — never "abstain". Interactive sessions have nothing to resume the
paused call, so the tool orphaned. Pre-2.1.89 builds ignored the unknown
value, which is why the hook worked when it shipped and broke later.

The fix is the two-branch pass-through contract:
- no context -> exit 0 with EXACTLY empty stdout
- memory nuggets present -> hookSpecificOutput with hookEventName +
  additionalContext ONLY (the documented shape; plan-tune Layer 8 memory
  injection ships through this branch and keeps working)

defer() is renamed passThrough() so the function says what it does, and
docs/spikes/claude-code-hook-mutation.md's protocol contract (cited by the
hook header) is corrected in the same commit — it taught '"defer" — let
permission flow continue' and was the reintroduction vector.

Test contract rewritten in the same commit (13 assertions across 3 files,
verified fail-first against the unfixed hook): pass-through paths assert
exact-empty stdout (a garbage/partial write cannot slip past an
optional-chained parse), the nugget path asserts permissionDecision is
ABSENT while additionalContext survives, and a new tripwire asserts no
non-deny path ever puts the string "permissionDecision" on stdout. The
deny (auto-decide) and Conductor prose-redirect paths are unchanged.

Deployment: no migration needed — settings.json points at the absolute
bash shim which execs the .ts live; /gstack-upgrade delivers the fix.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(one-way-doors): unify credential noun net + wire it into the runtime (#2024)

Library fix: revoke/reset/rotate now share ONE noun alternation (api key,
token, secret, credential, access key, password) with optional plural s?.
Pre-fix leaks: "reset my secret", "reset my access key", "revoke my secret"
(mismatched per-verb lists) and every plural form ("rotate the credentials",
"revoke all tokens" — \b(...)\b cannot match a trailing s).

Runtime wiring — the regexes could never fire in production before:
- gstack-question-preference --check gains --summary-stdin: the question
  text pipes via stdin (never argv — summaries carry quotes/newlines/shell
  metacharacters) and feeds isOneWayDoor alongside the id, so an ad-hoc
  destructive question with a stored never-ask preference now forces
  ASK_NORMALLY. Empty/absent stdin keeps exact id-only semantics.
- question-preference-hook falls back to classifyQuestion(question text)
  when the registry lookup misses, so unregistered destructive questions
  pass through to a human instead of auto-deciding.
- question-tuning resolver prose shows the piped form (SKILL.md regen lands
  in the wave's release commit).

Tripwires (verified fail-first): full verbs x nouns x singular/plural matrix
with the #2024 repro rows, benign-summary no-over-match rows, stdin
transport survival (quotes/newlines), empty-stdin fail-safe, and hook
fallback both directions (destructive -> pass-through, benign -> deny).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(design): loud integer-flag contract for --count/--retry/--timeout (#2032)

design variants --count abc silently generated ZERO variants and exited 0:
parseInt(NaN) flowed through Math.min into the generation loop bound. The
same NaN class was live on the two sibling flags in the same file:
--retry abc made generate() a silent no-op (attempt <= NaN never true, null
output, exit 0) and --timeout abc killed the serve board ~immediately
(setTimeout(NaN)).

New design/src/flag-utils.ts: parseIntFlag (pure, unit-testable) +
normalizeIntFlag (CLI wrapper). Contract matches the --viewports precedent
(error loudly on nonsense — these commands spend real image-API money, a
silent fixup hides typos from calling agents): undefined -> default; bare
flag/empty/non-integer ("3.7" rejected, not truncated)/below-min -> exit 1
with usage hint; above-max -> clamp with stderr warning. --count normalizes
at the variants() consumption site so programmatic callers are covered, with
the ceiling derived from STYLE_VARIATIONS.length instead of a magic 7; the
CLI passes the raw flag through (a pre-parseInt would truncate "3.7").

Tripwires live in test/design-flag-utils.test.ts — deliberately under test/,
not design/test/, which is invisible to the bun test glob, TEST_ROOTS, and
every workflow (wiring design/test/ into CI is a captured TODO).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(gbrain): thin-client state — remote-MCP brains no longer classify as broken-config (#2051)

A thin client (remote-HTTP MCP brain, no local engine by design) probed
`gbrain sources list`, which gbrain's dispatch guard REFUSES on thin clients
(exit 1, no recognized error string), so the classifier fell to its
defensive broken-config default and every suppression gate silently hid
brain-aware blocks from exactly the users on a shared team brain.

New 'thin-client' state, detected PRE-probe from gbrain's own remote_mcp
config marker via the existing gbrainConfigPath() helper (mirrors gbrain's
isThinClient(); honors GBRAIN_HOME; zero network, immune to error-string
drift), with a /thin[- ]client/ stderr backstop in the probe catch. Remote
reachability is deliberately NOT probed by the classifier — that is the
#1964 pathology; gbrain calls degrade gracefully at use time, and the detect
JSON says so honestly (gbrain_thin_client: {probed: false}).

The state is admitted at every suppression gate — gstack-gbrain-detect
--is-ok (drives setup + gbrain-refresh), gen-skill-docs' detection override,
gstack-config gbrain-refresh — while the sync stages (code/memory/dream)
SKIP with an accurate reason: code indexing runs on the brain server, memory
syncs via the remote brain's artifacts pull. The two consumer classes need
opposite answers, which is why this is a distinct state and not a
skip-the-probe special case. sync-gbrain Step 1.5 and setup-gbrain prose
route thin-client to proceed, never into broken-config remediation.

detectMcpMode secondary generalization: url-match against the config's
remote_mcp.mcp_url (deterministic — gbrain mounts at the generic /mcp path)
-> name pattern gbrain[-_]* -> stdio command token; gbrain_mcp_mode stays a
3-value enum.

Tripwires: end-to-end --is-ok exits 0 on a thin-client fixture AND still
exits 1 on broken-config (the gate didn't widen); pre-probe + stderr-fallback
classifier paths; 4 detectMcpMode identification cases incl. a non-matching
url that must NOT false-positive.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* release: v1.60.0.0 — regen SKILL.md, VERSION, CHANGELOG, TODOS follow-ups

- Regenerate all SKILL.md from templates (question-tuning --summary-stdin
  prose from #2024, context-restore branch preference from PR #2054,
  sync-gbrain/setup-gbrain thin-client prose from #2051) + llms.txt.
- VERSION + package.json -> 1.60.0.0 (bin/gstack-next-version, queue-aware:
  #1815 claims 1.59.0.0, #2213 claims 1.59.1.0).
- CHANGELOG release summary + itemized entry crediting @jbetala7 (x3) and
  @mvann.
- TODOS.md: three eng-review follow-ups (design/test CI wiring + documented
  pre-existing retry-after flake, /context-save worktree identity, gbrain
  reindex-in-place conditional on the new drift log).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(resolvers): compress --summary-stdin preamble prose to fit parity budget; re-bless ship goldens

The v1.57.7.0 parity suite caps investigate's generated size at 1.09x
baseline; the #2024 question-tuning prose (duplicated into every tier->=2
skill) tipped it to 1.092. Compressed to a single inline command + short
pointer (the full rationale lives in bin/gstack-question-preference's
header and the one-way-doors module docs). Ship goldens re-blessed against
the final resolver text (conscious template-change acknowledgment, per the
golden-file regression contract).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(e2e): office-hours-spec-review turn budget fits the carved skill layout (#2473)

The test failed deterministically with error_max_turns at 9 turns on main
and this branch alike (CI attempt logs + local main repro). Root cause from
the failing transcript: the Spec Review Loop content is carved out of
office-hours/SKILL.md into office-hours/sections/, so the agent needs
discovery hops (grep SKILL.md -> ls sections/ -> read the section) before it
can write — 8 tool turns + the closing text turn = 9 > the 8-turn budget,
which predates the carve. Observed failures wrote a CORRECT summary on tool
turn 8 and died on the closing turn.

maxTurns 8 -> 12. Verified: PASS locally post-fix (7 turns this run — the
extra headroom absorbs discovery-path nondeterminism).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(e2e): review-dashboard-via session budget survives runner contention (#2473)

The test failed on CI (and its baseline run) with the timeout signature:
0 turns, $0.00, exactly 183s, 3/3 attempts — the spawned claude -p session
never emitted a single stream event before the 180s inner timeout. The
file's tests run concurrently on one runner; session startup queues behind
sibling sessions, and this test had the tightest budget in the file (the
240s-budget tests in the same job passed). A clean local run takes 270s
wall for 4 turns, confirming 180s was too tight even without contention.

Inner timeout 180s -> 300s; outer bun timeout 240s -> 360s to keep headroom
over the inner budget. Verified: PASS locally post-fix (4 turns, 270s).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(e2e): retro-base-branch session budget survives runner contention (#2473)

Same class as review-dashboard-via, one test over in the same file: /retro
is a long multi-step flow whose clean pass measures 225-239s — a coin flip
against the 240s inner budget. First CI run passed at 225s; the rerun timed
out at the 240s line on all 3 attempts (exitReason "timeout"); the local
verification run passed at 239s, ONE second under the old cap.

Inner timeout 240s -> 360s; outer bun timeout 300s -> 480s for headroom.
Verified: PASS locally post-fix (17 turns, 239s).

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

---------

Co-authored-by: Jayesh Betala <jayesh.betala7@gmail.com>
Co-authored-by: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Co-authored-by: Michael Vann <9221873+mvann@users.noreply.github.com>
 2026-08-08 09:28:45 -07:00
Sinabina cbf8a2bec2 fix(gbrain): classify PGLite connect locks 2026-07-10 16:51:16 -07:00
Garry TanGitHubClaude Opus 4.8
 		9fd03fae9e v1.58.4.0 fix: high-priority community bug wave + PTY plan-mode smoke gate (#2077) 
* fix(gbrain): stop forcing GBRAIN_PREPARE on transaction-mode poolers (#1965)

buildGbrainEnv auto-set GBRAIN_PREPARE=true whenever DATABASE_URL targeted
port 6543, and the /sync-gbrain capability check exported it for the rest
of the skill run. Both had the semantics inverted: gbrain auto-disables
prepared statements on transaction-mode poolers because they break every
write there ("prepared statement does not exist"); GBRAIN_PREPARE=true is
gbrain's documented override for SESSION-mode poolers on 6543, not a
requirement for transaction mode. The #1435 search symptom the auto-set
worked around was fixed gbrain-side.

Remove both force-sets. A caller-set GBRAIN_PREPARE (either value) still
passes through untouched, preserving the session-mode-on-6543 escape hatch.
isTransactionModePooler stays exported.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(gbrain): classify probe timeout as its own status; sync proceeds instead of skipping (#1964)

The 5s engine probe misclassified healthy-but-slow engines (cold Supabase
pooler connections measured at 6.9-10.7s) as broken-config, so /sync-gbrain
silently skipped code+memory and told the user their config was malformed.

- New "timeout" status: probe killed at the deadline with no recognized
  stderr pattern. Default deadline is now 15s, overridable via
  GSTACK_GBRAIN_PROBE_TIMEOUT_MS (tests set 300ms against a fake that
  sleeps 2s).
- Sync stages PROCEED on timeout with a stderr warning naming the env knob;
  a genuinely-dead engine surfaces its real error at the first operation
  instead of a false config diagnosis.
- Consistency everywhere "ok" gated behavior: gstack-gbrain-detect --is-ok
  exits 0 on timeout, and gen-skill-docs' detection gate accepts it, so a
  slow engine no longer silently suppresses brain-aware features.
- Status cache: key now includes the effective probe timeout (raising it
  invalidates a cached timeout) and GBRAIN_HOME; config detection honors
  GBRAIN_HOME so relocated-home users stop being misclassified as
  missing-config.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(bins): cygpath-normalize SCRIPT_DIR for bun imports; surface learnings-log errors (#1950)

Under Windows git-bash, pwd yields a POSIX path (/c/Users/...) that Bun on
Windows cannot resolve as an ES module specifier. gstack-learnings-log
interpolates SCRIPT_DIR into a bun -e import, so every invocation died with
"Cannot find module" — and 2>/dev/null swallowed the error, silently
dropping every AI-logged learning for Windows users.

- 3-line cygpath -m guard in gstack-learnings-log and gstack-question-log
  (which gains the same import shape in the next commit). Matches the
  duplicated IS_WINDOWS convention in setup; no shared shell lib exists.
- learnings-log adopts question-log's set +e / TMPERR capture pattern
  wholesale: validation errors now print to stderr. The old
  `if [ $? -ne 0 ]` check was dead code under set -euo pipefail — the
  script exited at the failing assignment before reaching it.
- New test/bin-windows-bun-import-paths.test.ts: static invariant (any
  bash bin interpolating $SCRIPT_DIR into a bun -e import must carry the
  guard) + behavioral end-to-end run invoked via `bash <bin>` — added to
  the windows-free-tests workflow list so the conversion is proven on the
  only platform where the bug exists.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(question-log): dedupe INJECTION_PATTERNS via lib/jsonl-store (#1934)

bin/gstack-question-log carried a local copy of the injection-pattern list,
so pattern fixes to lib/jsonl-store.ts never propagated — including the
/override[:\s]/i false-positive fix arriving via community PR #1940.
Import the shared hasInjection instead (enabled by the previous commit's
cygpath guard). question-log also gets the lib's stricter superset
(human:, disregard, from-now-on, approve-all patterns).

Tests pin the contract in a #1940-order-independent way: an "Override:
ignore all previous instructions" header is rejected, "prose overrides the
deterministic table" is accepted, and a static invariant keeps local
INJECTION_PATTERNS duplicates out of the bin.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(security): community-pulse + both dashboards never report fake zeros (#1947)

The security-signaling surface failed open at three layers — every failure
mode read as a reassuring "0 attacks" / "0 installs":

- community-pulse edge function: supabase-js returns {data,error} without
  throwing, and all five queries discarded `error` — a DB outage produced
  real-looking zeros via the SUCCESS path, and the catch (also returning
  zeros with HTTP 200) was unreachable for query failures. Every query now
  destructures and throws; the catch serves the stale cache (marked
  "stale": true) when one exists, else 503 {"error":"pulse_unavailable"}.
  Success responses carry "status":"ok" so clients can distinguish
  authoritative data from legacy backends. NOTE: the edge function deploys
  out-of-band (supabase functions deploy community-pulse).
- gstack-security-dashboard: captures the HTTP status; non-200 / network
  failure / error body / missing section → "unknown — backend error";
  jq missing → "unknown — install jq" (the lossy grep fallback broke on
  nested arrays and under-reported attacks as zero — removed); a 200
  without the new marker shows figures with an "unverified (legacy
  backend)" note. Also fixes a latent display bug: the TOTAL grep matched
  the digit 7 inside "attacks_last_7_days" and misreported every count.
- gstack-community-dashboard: same class — curl || echo "{}" plus
  grep || echo "0" printed "Weekly active installs: 0" on any failure.
  Now "unknown — backend error (HTTP N)".

test/security-dashboard-fallback.test.ts pins the matrix (200+marker,
200-legacy, 503, network failure) x (jq present, jq absent) for both bins:
"unknown" states never render as 0.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(telemetry): redact error_message spans before they leave the machine (#1947)

error_message was uploaded with only quote/newline escaping — stack traces
and failed-API errors can embed credentials, private paths, and hostnames,
and the sync path strips only _repo_slug/_branch.

New lib/redact-engine.ts export redactFindingSpans(): replaces EVERY
finding's span with <REDACTED-{id}> regardless of tier (applyRedactions is
the interactive PII-only path and exits nonzero on credential findings, so
it can't serve machine egress). Returns null when a span can't be located —
callers drop the whole payload rather than risk a leak.

gstack-telemetry-log pipes error_message through it at LOG time, so the
local JSONL at rest is clean too; surrounding text survives for crash
triage. FAIL CLOSED: bun missing, engine error, or non-JSON-string output
all null the field. Tests pin: embedded ghp_ token → <REDACTED-github.pat>
with context intact; redactor unavailable → null; raw bytes on disk never
contain the token.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(redact): prepush guard fails closed on git failure; /ship owns hook install (#1946)

Two gaps closed:

1. Fail closed. The git() helper returned "" on ANY non-zero exit or
   maxBuffer overflow (status null), addedLinesFor produced an empty
   string, and the push sailed through unscanned — fail-open on exactly
   the oversized-diff case where a large secret-bearing blob is most
   likely. The diff call now uses a strict variant that throws; main
   blocks with a clear message naming the GSTACK_REDACT_PREPUSH=skip
   escape valve. Probe calls (symbolic-ref, rev-parse, merge-base) keep
   the permissive helper — their failures are normal control flow.

2. Install path. The hook was installed by nothing ("opt-in, installed by
   nothing" was the issue's words). ./setup runs in the gstack checkout —
   the wrong repo for a per-project hook — so it gets a one-line hint
   only. /ship owns per-repo install: config redact_prepush_hook=true +
   hook missing → silent install (consent already given); config unset +
   no ~/.gstack/.redact-prepush-prompted marker → one-time machine-wide
   AskUserQuestion offer, answer persisted. ship/SKILL.md regenerated in
   this same commit (check-freshness bisect discipline).

Tests: unscannable diff (bogus SHAs) → exit 1 + valve named; empty-but-
successful diff → exit 0; static asserts pin setup as hint-only and the
ship template as the installer surface.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* feat(redact): six new credential patterns — GitLab, HuggingFace, npm, DigitalOcean, Bearer, GCP SA (#1946)

Coverage gaps from the #1946 security review, including token types for
tooling gstack itself drives (glab):

HIGH (block): gitlab.token (glpat-/glptt-/gldt-), huggingface.token (hf_),
npm.token (npm_), digitalocean.token (dop_v1_), gcp.service_account (the
JSON-escaped "private_key" form that dodges pem.private_key's literal-block
match when minified, confirmed by "private_key_id" proximity).

MEDIUM (warn): auth.bearer — the most FP-prone shape in the set (docs are
full of "Authorization: Bearer <token>"), so it requires header-context
proximity and the same entropy>=3.0 + placeholder validator recipe as
env.kv. "Bearer YOUR_TOKEN_HERE" never fires; calibration over coverage,
per the cries-wolf principle.

All shapes are linear-time; test/redact-pattern-lint.test.ts covers them
automatically. Engine tests add positive + placeholder-negative cases per
pattern.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test: coverage-audit additions for the fix wave

Ship Step 7 gap-fill (all passing, 248 tests across the touched suites):
memory + dream stage probe-timeout proceeds, gbrain-detect override paths,
stale-flag passthrough, 200-body-missing-.security fail-closed case,
telemetry redaction edges, and credential-pattern edge cases.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix: pre-landing review fixes

Review army findings (1 critical, auto-fixed with regression tests):

- CRITICAL (security specialist, verified live): redactFindingSpans spliced
  only the regex capture span, and pem.private_key / gcp.service_account
  capture just the BEGIN-header — the key body survived "redaction" and
  shipped via telemetry. Marker-only patterns now drop the whole payload
  (null, fail closed). Overlapping spans (Bearer+JWT on the same bytes) are
  coalesced before splicing so stale offsets can't leave partial secret
  bytes behind.
- gitStrict: drop the dead `|| r.status === null` disjunct (null !== 0
  already covers it); add the signal-kill/null-status regression test the
  docstring promised.
- security-dashboard human mode flags stale snapshots ("figures may be out
  of date") instead of presenting frozen counts as current.
- community-dashboard marker check uses jq when available — the grep-only
  variant misclassified whitespaced/reserialized bodies as legacy.
- telemetry fail-closed test now shadows bun with a failing stub
  (deterministic on any host layout); stale "five status cases" describe
  title renamed.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix: adversarial review fixes (Claude + Codex cross-model passes)

Both adversarial passes ran against the wave; every FIXABLE finding landed
with a regression test:

- probeTimeoutMs clamps to >=1ms: a fractional override floored to 0, and
  execFileSync treats timeout:0 as NO timeout — the probe that exists to
  bound hangs could hang forever (found by both models independently).
- /ship silent hook install now requires the hooks dir to live inside
  .git: with core.hooksPath (husky's COMMITTED .husky/), the chaining
  installer would have renamed the team's committed pre-push and written a
  machine-local wrapper into the working tree (found by both models).
- gstack-config gbrain-refresh accepts the "timeout" status — the last
  consumer still gating on literal "ok" (Codex); gstack-gbrain-detect's
  config-derived fields honor GBRAIN_HOME so the detection JSON can't
  report status ok alongside config_exists false (Codex).
- prepush: a remote sha absent locally (shallow clone / stale fetch) falls
  back to the merge-base/empty-tree range — scans MORE, never blocks a
  legitimate push into training users toward --no-verify.
- dashboards: curl's own 000 no longer doubles to "HTTP 000000"; the
  community dashboard flags stale snapshots like the security one; array
  sections parse via jq (the sed/grep loops truncated at the first ']');
  the no-jq marker grep tolerates whitespace.
- telemetry: multi-line redactor output nulls the field instead of
  corrupting the JSONL record; setup's hint fires only when the config key
  is genuinely unset (an explicit false is a recorded decline); the /ship
  prompt marker honors GSTACK_HOME.

Kept as designed (cross-model tension noted): Bearer stays MEDIUM in the
prepush gate — a HIGH Bearer would block every docs example; the entropy
validator can't eliminate that FP class, and MEDIUM warns visibly.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* chore: bump version and changelog (v1.57.11.0)

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* docs: P1 TODO — eval harness live progress + incremental persistence

Root-caused during this ship: a killed eval run was indistinguishable from a
healthy one for hours (per-file output buffering across mega test files, no
incremental eval-store writes, no honest liveness signal). Full context and
starting points in the entry.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test: fix operational-learning E2E fixture — copy lib/jsonl-store.ts

Pre-existing breakage, proven on main: gstack-learnings-log has imported
lib/jsonl-store.ts (shared injection patterns) since v1.57.5.0 / #1910, but
the fixture copies only the bin scripts — the bin exits 1 before writing
anything, on main silently (stderr swallowed) and on this branch loudly
(the #1950 error-surfacing made the four-day-old failure visible). A real
install always ships bin/ and lib/ together; the fixture now does too.
Verified: the fixture-shaped invocation writes the learning (exit 0) with
lib present, exits 1 on both main and this branch without it.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* fix(ios-qa): isolate E2E tests under --concurrent (3 real races)

The ios-qa E2E file failed intermittently under `bun test --concurrent`
(the eval harness default). Three distinct shared-state races, all fixed:

1. Shared pidfile: a module-level `workDir` reassigned in beforeEach was
   clobbered by parallel tests, so concurrent daemons collided on the same
   pidfile and the loser returned `already_running`. Each test now gets its
   own dir via makeWorkDir().
2. process.env path globals: tests set GSTACK_IOS_AUDIT_PATH /
   _ATTEMPTS_PATH / _ALLOWLIST_PATH on the shared process env; concurrent
   tests stomped each other's audit/attempts destinations. Threaded
   auditPath/attemptsPath/allowlistPath through DaemonOptions (and
   mintForCaller) as explicit args — env is no longer load-bearing.
3. afterEach cleanup race: the per-test cleanup drained a shared dir array,
   so the first test to finish deleted still-running tests' workDirs
   mid-assertion. Moved to afterAll (cleans once, after all settle).

Verified: 5/5 clean full-suite runs at --max-concurrency 15 (was
intermittent); daemon unit suite 91/91; daemon source compiles. The paths
default to the env-derived locations when options are omitted, so the
production CLI path is unchanged.

Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>

* test(pty): pin spawned claude to EVALS model chain (default claude-sonnet-4-6)

launchClaudePty spawned the interactive `claude` TUI with no --model flag, so
the child inherited the operator's ~/.claude/settings.json model. On a
slow-thinking model that meant 5+ min of extended thinking on empty plan-mode
context, timing out the plan-mode smoke tests regardless of contention. Pin the
model via opts.model ?? EVALS_MODEL ?? 'claude-sonnet-4-6' — byte-identical to
session-runner.ts:144, so PTY and `claude -p` evals always agree.

Pushed before extraArgs (last flag wins, so a per-test --model still overrides).
Placement leaves the spawn region byte-stable for a clean merge with the
in-flight hermetic-env branch. Plumbed model through the three plan-skill
wrappers. Static-grep tripwires guard the pin, its fallback chain, the
before-extraArgs ordering, and all three wrapper forwards.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(pty): detect markdown bold-bullet prose AUQs (fixes office-hours smoke)

office-hours auto-mode renders its mode question as `- **Building a startup**`
markdown bullets (office-hours/SKILL.md.tmpl:102) with no letter/number marker.
isProseAUQVisible only matched `A)`-style lettered or `1.`-style numbered
options, so the question went undetected: the model surfaced it at ~2m19s
(well under the 300s budget) but the harness kept scoring the run "working"
off the spinner glyphs and timed out — a false timeout on a question that was
already on screen.

Add Pattern 3: when an interrogative line ('?') is present AND 3+ bold-bullet
markers (`- **`) appear in the 4KB tail, classify as a prose AUQ. Bold is the
discriminator vs incidental prose bullets; the line anchor is dropped (stripAnsi
can collapse option lines) and the existing `❯ 1.` cursor gate still defers to a
live native list. Wires through the existing classifyVisible 'asked' path and the
timeout high-water-mark, so office-hours now classifies 'asked' instead of
'timeout'. Five unit cases: the office-hours render passes; no-'?', <3-bullet,
plain-bullet, and native-cursor cases stay false.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(pty): detect stripAnsi-collapsed prose AUQs + judge spinner-precedence

The plan-eng/plan-design plan-mode + finding-floor smokes timed out even when
the skill HAD rendered a complete prose AskUserQuestion and was waiting: the PTY
strips cursor-positioning escapes, collapsing the option newlines/spaces so
"A) ..." arrives as "A(recommended)" / "-B:" and "Reply with A, B, or C" as
"ReplywithA,B,orC". Every line-anchored detector (Patterns 1-3) returns false on
those bytes, so proseAUQEverObserved never latched and the run timed out on a
question that was already on screen.

Add Pattern 4/5: a two-signal collapsed-form detector — a reply/recommendation
marker (space-insensitive "reply with [A-D]", "Recommendation:", or
"(recommended)") AND 2+ distinct A-D letters each punctuated by ) : or (. The
conjunction is what separates a real AUQ from incidental report prose; verified
true on the verbatim failing-run buffers where Patterns 1-3 return false.

Also fix the Haiku judge spinner bias: of 614 verdicts, 569 were 'working' and
95 of those noted a question was visible — Claude Code keeps the spinner
animating at an idle prose decision, so the judge coin-flipped. Add a precedence
override: when an option list AND a Recommendation/Reply instruction are both
visible, classify WAITING even with spinner glyphs. Kept the strict dual-signal
gate (never option-list-alone) so auto-decide-preserved doesn't flip.

5 unit tests pin the two-signal contract (2 true on real collapsed bytes, 3
false guards). 90 -> 95 pass.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* feat(plan-review): ask-first scope gate for plan-eng + plan-design review

On an empty/cold invocation, plan-eng-review and plan-design-review would dive
straight into repo exploration (plan-eng) or a 7-pass mockup+audit (plan-design)
and only ask the user much later, if at all. plan-ceo-review already asks first
via an unconditional Step-0 gate and behaves well; these two did not.

Add a hard-STOP scope gate as the FIRST operational instruction in each skill
(above the design-doc check / pre-review audit / mockup defaults it explicitly
overrides): the first tool call must be AskUserQuestion confirming the review
target, before any git/Read/Grep/Glob/Bash or mockup generation. Under
--disallowedTools the options render as plain column-0 lettered prose with a
Recommendation + "Reply with A, B, or C" line so the answer is detectable.

This is correct cold-start UX (confirm what to review before grinding a full
review on nothing) and it is the product half of the plan-mode smoke fix; the
harness collapsed-form detector is the deterministic half that catches the ask
however it renders. Templates + regenerated SKILL.md (default variant).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* test(tiers): reclassify stochastic plan-eng/plan-design ask-first smokes as periodic

plan-eng-review and plan-design-review run a long explore/audit before their
first AskUserQuestion, so whether the plan-mode + finding-floor smokes reach a
terminal outcome within the 300s/600s budget depends on stochastic ask-first
compliance (measured ~50-67%/run even with the hardened gate). Per the
"non-deterministic -> periodic" tiering rule, move the four affected smokes
(plan-eng/plan-design review-plan-mode + finding-floor) to periodic.

The deterministic harness fix (collapsed-form detector + judge precedence) and
the ask-first gate lift these from always-failing to mostly-passing and are the
real product+harness improvements; periodic monitoring tracks the rate weekly
without blocking PRs on an LLM coin-flip. plan-ceo/plan-devex ask-first reliably
and stay gate-tier.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* ci(evals): gate the deterministic PTY plan-mode smokes in CI

The real-PTY plan-mode smokes never ran in CI — the gate was local-only. Add an
e2e-pty-plan-smoke matrix suite running the two deterministically-reliable ones
(office-hours-auto-mode, plan-mode-no-op) so a regression there blocks PRs. The
stochastic plan-eng/plan-design ask-first smokes stay periodic (touchfiles
E2E_TIERS) and are not CI-gated.

A fresh CI container has no ~/.claude.json, so the spawned interactive `claude`
would wedge on the onboarding + API-key-approval dialog. Add a scoped seed step
(hasCompletedOnboarding + key approval, its own ANTHROPIC_API_KEY env) before the
run — mirrors what the hermetic E2E child env seeds. Per-suite timeout override
(35 min) via matrix.suite.timeout so the PTY suite has headroom for --retry 2
without bumping the other 12 suites. Report runner count 12 -> 13.

Validate via workflow_dispatch before relying on the gate (PTY-in-CI is new).

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* ci(evals): install gstack skill registry for the PTY smoke suite

The first dry-run of e2e-pty-plan-smoke failed: the spawned interactive `claude`
printed "Unknown command: /plan-ceo-review". .claude/skills is gitignored, so a
fresh CI checkout has no gstack skill registry and the TUI can't resolve
/office-hours or /plan-ceo-review.

Add a Register step (scoped to the suite, after Seed, before Run) that mirrors
setup's --no-prefix user-scoped registry minimally: $HOME/.claude/skills/gstack
-> repo (resolves the preambles' absolute ~/.claude/skills/gstack/bin/* and
<skill>/sections/* paths) + per-skill SKILL.md/sections symlinks for the two
skills these tests invoke. HOME is /github/home in this container and the runner
adds no HOME/CLAUDE_CONFIG_DIR override (no hermetic mode), so $HOME is the right
anchor — the Seed step already proved claude reads it. No ./setup (binary build
+ Chromium + fonts + /dev/tty prompt); SKILL.md + bin/ + sections/ are committed.

Self-validating: fails the step loudly on a dangling symlink or missing
`name:` frontmatter, so a moved target surfaces here instead of as a silent
35-min "Unknown command" timeout.

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v1.58.4.0)

Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>

---------

Co-authored-by: Claude Fable 5 <noreply@anthropic.com>
 2026-06-21 07:15:19 -07:00
Garry TanGitHubClaude0xDevNinjadrummermsJayesh BetalaJason Shultzgenisis0x
 		026751ea20 v1.40.0.0 fix wave: gbrain sync hardening (8 community PRs + migration) (#1547) 
* fix(gbrain-sync): fold hostname into code-source id hash + migration (#1414)

Cherry-picked from #1468 by 0xDevNinja and extended with the
hostname-fold migration that codex review surfaced.

Pre-fix `deriveCodeSourceId` hashed the absolute repo path alone, so two
machines with identical home-dir layouts (chezmoi-managed dotfiles,
ansible-provisioned VMs) derived the same id and clobbered each other's
`local_path` in a federated brain. Last-writer-wins, with cryptic "Not a
git repository" errors on the loser.

Hash key is now `\${hostname}::\${path}`. Conductor worktrees on a single
host stay distinct (path entropy unchanged within a host); cross-machine
federations stop colliding.

Migration (D1=B + codex refinements): every existing user has a
pre-#1468 path-only-hash source id in their brain that no longer matches
what `deriveCodeSourceId` produces. Without migration, the next sync
registers a fresh source and orphans the old one. This commit adds:

- \`derivePathOnlyHashLegacyId\` — separate helper for the pre-#1468 form.
  Distinct from \`deriveLegacyCodeSourceId\` (pre-pathhash v1.x form);
  both probes run.

- \`planHostnameFoldMigration\` — feature-checks \`gbrain sources rename
  <old> <new>\` (exact argument shape, not just \`--help\`), gates on
  path-drift (skip migration if old source's \`local_path\` differs from
  current repo root), and falls back to register-new + sync-OK +
  remove-old when rename is unsupported. As of gbrain 0.35.0.0 the
  rename subcommand does not exist, so users go through the cleanup
  path; the rename path stays dormant until gbrain ships it.

- \`removeOrphanedSource\` — called only AFTER new-source sync verifies
  page_count > 0. Closes the data-loss window codex flagged where
  "register new, remove old before sync" can wipe pages if sync fails.

- \`sourceLocalPath\` — looks up a source's \`local_path\` from
  \`gbrain sources list --json\` for the drift gate.

- Helpers accept an optional \`env\` parameter so tests can inject a
  gbrain shim via PATH without process-wide PATH mutation (Bun's
  spawnSync doesn't pick up runtime PATH changes). Pre-positions for
  commit 4's centralized gbrain-exec helper.

- \`if (import.meta.main)\` guard around \`main()\` so the helpers can be
  imported for in-process unit tests.

Tests cover: pure derivation, ids-match degenerate case, no-legacy
short-circuit, path-drift skip path, rename path with shim, cleanup
fallback when rename unsupported, cleanup fallback when rename call
itself fails, source-lookup happy/missing/error paths.

\`GSTACK_HOSTNAME\` env var is a test-only knob; production uses
\`os.hostname()\`.

Fixes #1414

Co-Authored-By: Claude <noreply@anthropic.com>

* fix(gbrain-sync): cut source-id slugs on hyphen boundaries (+ #1357)

Cherry-picked from #1481 by drummerms and extended with the explicit
HTTPS-remote regression case for #1357 (decision D2=A).

`constrainSourceId` truncated the slug with `slug.slice(-tailBudget)`,
which cut mid-word when the boundary fell inside a token. For a repo
where the combined `prefix-org-repo-pathhash` exceeded 32 chars, this
produced embarrassing artifacts like `gstack-code-kill-270c0001-c32152`
(from `drummerms-av-sow-wiz-skill-270c0001`).

Two changes carried from #1481, adapted for the #1468 hostpathhash:

1. `constrainSourceId` now walks hyphen-separated tokens from the right,
   accumulating whole tokens until adding the next would exceed
   `tailBudget`. When no token fits, falls through to the existing
   `${prefix}-${hash}` form.

2. `deriveCodeSourceId` now retries with `repo-only-hostpathhash`
   (dropping the org segment) when the full `org-repo-hostpathhash`
   triggers truncation. Keeps the repo name readable when it fits at all.

Plus a new test asserting the source id is period-free for the exact
HTTPS-with-.git remote shape from #1357 (`https://github.com/foo/bar.git`).
canonicalizeRemote strips `.git`; the sanitizer strips any residual
non-alnum. The test closes #1357 by pinning the property.

Closes #1357

Co-Authored-By: Claude <noreply@anthropic.com>

* fix(gbrain): probe CLI without command builtin

* fix(gbrain-sync): centralize gbrain spawn surface + seed DATABASE_URL

Cherry-picked from #1508 by jasshultz, restructured per codex review #4
and #7 to widen scope and centralize the spawn surface.

The bug: gbrain auto-loads .env.local from cwd via dotenv. When
/sync-gbrain runs inside a Next.js / Prisma / Rails project whose
.env.local defines its own DATABASE_URL (pointing at the app's local
DB), gbrain reads that value instead of its own
~/.gbrain/config.json — auth fails, code + memory stages crash.

This commit:

- Adds lib/gbrain-exec.ts: buildGbrainEnv, spawnGbrain, execGbrainJson,
  execGbrainText, spawnGbrainAsync (the last one for memory-ingest's
  streaming gbrain import call). buildGbrainEnv seeds DATABASE_URL from
  ${GBRAIN_HOME:-$HOME/.gbrain}/config.json, returns a fresh env object
  (never the caller's by identity — codex review #11), and honors the
  GSTACK_RESPECT_ENV_DATABASE_URL=1 escape hatch.

- Routes every gbrain spawn in bin/gstack-gbrain-sync.ts and
  bin/gstack-memory-ingest.ts through the helpers. Both files now own
  zero direct spawnSync("gbrain"|spawn("gbrain"|execFileSync("gbrain"
  call sites.

- Threads buildGbrainEnv into the spawnSync("bun", [memory-ingest], ...)
  grandchild in runMemoryIngest (codex review #7). Without this, the
  parent fix is half-baked — the bun child inherits a clean env but
  needs DATABASE_URL pre-seeded too. spawnGbrainAsync inside
  memory-ingest provides defense in depth for standalone invocations.

- Adds GBRAIN_HOME support — aligns with detectEngineTier (already
  honors GBRAIN_HOME) so all gstack-side gbrain calls agree on which
  config file matters. Resolves baseEnv.HOME first, then homedir(), so
  test injection works without process-wide HOME mutation.

- Adds test/build-gbrain-env.test.ts: 10 unit tests covering all five
  env-seeding branches (seed from config / override caller /
  GSTACK_RESPECT escape hatch / missing config / unparseable config /
  no database_url field / GBRAIN_HOME path / object-identity guard /
  unrelated-vars preservation / idempotent-when-matches).

- Adds test/gbrain-exec-invariant.test.ts: static-source check that
  greps both bin/gstack-gbrain-sync.ts and bin/gstack-memory-ingest.ts
  for direct spawnSync("gbrain"|spawn("gbrain"|execFileSync("gbrain"|
  execSync(...gbrain matches and fails the build if any are found.
  Refactor-proof against future contributors adding a new gbrain spawn
  without env threading.

The invariant is intentionally narrow — only the two files where the
DATABASE_URL bug actually hurts users are guarded. Migrating the
spawn sites in lib/gbrain-local-status.ts, lib/gstack-memory-helpers.ts,
and bin/gstack-brain-context-load.ts is a follow-up.

Co-Authored-By: Jason Shultz <jasshultz@gmail.com>
Co-Authored-By: Claude <noreply@anthropic.com>

* fix(gbrain-sync): add .gbrain-source to consumer repo .gitignore (#1384)

The v1.29.0.0 changelog promised .gbrain-source would be added to the
consuming repo's .gitignore so the per-worktree pin stays local, but the
change actually only added it to gstack's own .gitignore. Without the
consumer-side entry, the pin gets committed and Conductor sibling
worktrees of the same repo + branch step on each other's pin every time
anyone commits.

Add ensureGbrainSourceGitignored after a successful gbrain sources
attach in runCodeImport. Idempotent on repeat runs (line-trim match),
creates .gitignore if missing, logs a warning and continues on
permission errors so a read-only checkout doesn't fail the sync.

Gate the top-level main() call behind import.meta.main so tests can
import the helper without triggering a full sync run on module load.

Tests in test/gbrain-source-gitignore.test.ts cover: create-when-missing,
append-without-trailing-newline, append-with-trailing-newline,
idempotent on repeat, recognize whitespace-surrounded entry, no-throw
on read-only file. 6 pass.

* fix(gbrain-sources): bump gbrain sources list --json timeout 10s → 30s

Supabase free-tier cold-starts can push `gbrain sources list --json` past
10s (observed 14.5s in the wild), causing probeSource() to throw ETIMEDOUT
during /sync-gbrain code stage even though the underlying CLI was healthy.
Matches the 30s ceiling already used by `sources add` / `sources remove`
in the same file.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* fix(brain-allowlist): sync project-root eng-review-test-plan artifacts (#1452)

Cherry-picked from #1465 by genisis0x and extended with the v1.40.0.0
upgrade migration that codex review #5 surfaced.

#1465 alone only patches bin/gstack-artifacts-init, which means fresh
installs and re-inits pick up the new pattern. But existing users who
already ran v1.38.1.0 have a `.migrations/v1.38.1.0.done` marker — that
migration won't re-run no matter what we change. So their installed
`.brain-allowlist`, `.brain-privacy-map.json`, and `.gitattributes` stay
without the new pattern, and `/plan-eng-review` artifacts continue to
silently drop out of their federation queue.

This commit:

- bin/gstack-artifacts-init: adds projects/*/*-eng-review-test-plan-*.md
  to the three managed blocks. v1.38.1.0 covered design + test-plan; this
  completes the set for /plan-eng-review.

- gstack-upgrade/migrations/v1.40.0.0.sh: targeted in-place repair for
  existing installs. Same idempotent jq-based shape as v1.38.1.0. Adds
  the new pattern to .brain-allowlist (before the USER ADDITIONS marker),
  .brain-privacy-map.json (as class=artifact), and .gitattributes (as
  merge=union). NEVER commits + pushes — the user controls when the
  patches ship to their federated artifacts repo.

- test/artifacts-init-migration.test.ts: 5 new tests covering the
  v1.40.0.0 migration applied on top of a post-v1.38.1.0 state, jq
  patching, gitattributes append, idempotent re-run, and done-marker
  write when files are missing entirely.

Co-Authored-By: Claude <noreply@anthropic.com>

* fix(gbrain-install): skip postinstall on Windows MSYS/MINGW + post-install probe

Cherry-picked from #1487 by genisis0x and extended with the post-install
subcommand probe per T6 / codex review #19.

`bun install` in $INSTALL_DIR fails on Windows MSYS/MINGW/Cygwin shells
because gbrain's native postinstall script mis-parses path arguments
and aborts with a non-zero exit, breaking gstack-gbrain-install for
Windows users running git-bash/MSYS2. The package installs cleanly
without scripts.

This commit:

- Adds Windows shell detection via `uname -s` matching
  MINGW*/MSYS*/CYGWIN*/Windows_NT (#1487's case statement already covers
  all four — codex review #18 confirmed MINGW* is included). Windows
  paths get `bun install --ignore-scripts`; macOS and Linux unchanged.

- Adds a post-install probe of `gbrain sources --help`. `gbrain --version`
  already runs (D19 PATH-shadowing validation), but version success
  doesn't prove the subcommand surface is reachable — and
  `--ignore-scripts` may have skipped artifacts that subcommands need.
  Probe failure logs a clear warning (with Windows-specific remediation
  pointing at re-running `bun install` outside MSYS) but does NOT exit
  non-zero; users may still get value from gbrain even if the probe
  fails transiently.

Refs #1271

Co-Authored-By: Claude <noreply@anthropic.com>

* chore: v1.40.0.0 — gbrain sync hardening wave

Bumps VERSION 1.39.2.0 → 1.40.0.0 (MINOR — substantial gbrain capability
hardening across sync pipeline, install path, federation allowlist;
~600 net LOC added across 8 community PRs + plan-review refinements).

CHANGELOG entry follows the release-summary format: two-line headline,
lead paragraph, "numbers that matter" with before/after table across 8
user-visible surfaces, "what this means for builders" closer, itemized
Added/Changed/Fixed/NOT fixed/For contributors sections.

Per-commit contributor credits: 0xDevNinja, drummerms, Jayesh Betala,
Jason Shultz, genisis0x. Also names NikhileshNanduri and realcarsonterry
in the wave's "Fixed" section for independent submissions of the
.gbrain-source gitignore bug.

Co-Authored-By: Claude <noreply@anthropic.com>

---------

Co-authored-by: 0xDevNinja <manmit0x@gmail.com>
Co-authored-by: Claude <noreply@anthropic.com>
Co-authored-by: drummerms <mike@av2o.com>
Co-authored-by: Jayesh Betala <jayesh.betala7@gmail.com>
Co-authored-by: Jason Shultz <jasshultz@gmail.com>
Co-authored-by: genisis0x <manietdavv@gmail.com>
 2026-05-17 08:26:36 -07:00
Garry TanGitHubClaude Opus 4.7
 		e362b0ae2f v1.37.0.0 feat: split-engine gbrain (remote MCP brain + local PGLite for code) (#1500) 
* feat(gbrain): add lib/gbrain-local-status classifier with 5-state engine status + 60s cache

Foundation for split-engine gbrain: shared classifier used by both
bin/gstack-gbrain-detect (preamble probe) and bin/gstack-gbrain-sync.ts
(orchestrator SKIP-when-not-ok). Single source of truth.

Probes via `gbrain sources list --json` and classifies stderr against the
same patterns lib/gbrain-sources.ts:66-67 already uses ("Cannot connect to
database", "config.json"). Returns one of: ok, no-cli, missing-config,
broken-config, broken-db. Defensive default: unrecognized failures
classify as broken-config so the raw stderr can be surfaced upstream.

Cache at ~/.gstack/.gbrain-local-status-cache.json keyed on
{home, path_hash, gbrain_bin_path, gbrain_version, config_mtime, config_size}
with 60s TTL. Cache invalidates on any invariant change. --no-cache option
busts the cache for callers that just mutated state (/setup-gbrain,
/sync-gbrain after init/migration).

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* refactor(gbrain): rewrite gstack-gbrain-detect bash→TS + add gbrain_local_status field

Replaces the bash detect helper with a bun shebang script sharing the
gbrain_local_status classifier from lib/gbrain-local-status.ts with the
sync orchestrator. Single source of truth for engine-status classification
between preamble-probe and orchestrator-skip paths.

Filename stays gstack-gbrain-detect (no .ts extension) so existing skill
preamble callers shell out unchanged. Shebang `#!/usr/bin/env -S bun run`
resolves bun at runtime.

Output is key/type backward-compatible with the bash version per plan
codex #5: the 9 pre-existing keys (gbrain_on_path, gbrain_version,
gbrain_config_exists, gbrain_engine, gbrain_doctor_ok, gbrain_mcp_mode,
gstack_brain_sync_mode, gstack_brain_git, gstack_artifacts_remote) stay
identical in name + type + value semantics. One new key added:
gbrain_local_status (5-state string enum).

Updates the existing schema regression at test/gstack-gbrain-detect-mcp-mode.test.ts
to include the new key. Adds test/gbrain-detect-shape.test.ts asserting
the regression contract for future changes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(gbrain): orchestrator SKIP when local engine not ok + remote-http transcripts via artifacts pipeline

Two changes in the sync orchestrator, both per plan D11/D12:

1. bin/gstack-gbrain-sync.ts: runCodeImport + runMemoryIngest call
   localEngineStatus() (shared classifier from lib/gbrain-local-status.ts).
   When status is not 'ok', return a SKIP stage result with a clear reason
   instead of crashing with "source registration failed: gbrain not
   configured". Brain-sync stage runs regardless — it doesn't depend on
   local engine. dry-run preview path is gated above the check so it
   continues to show would-do steps even when the engine is broken.

2. bin/gstack-memory-ingest.ts: when gbrain MCP is registered as
   remote-http (Path 4), persist staged transcripts to
   ~/.gstack/transcripts/run-<pid>-<ts>/ instead of the ephemeral
   ~/.gstack/.staging-ingest-<pid>-<ts>/ tmp dir, and SKIP the local
   `gbrain import` call entirely. The artifacts pipeline (gstack-brain-sync
   push to git, brain admin pulls and indexes) handles routing to the
   remote brain. Local PGLite (when present via Step 4.5) stays code-only.

State recording still happens — prepared pages get their mtime+sha256
stamped under remote-http mode so the next /sync-gbrain doesn't
re-stage them. Cleanup is skipped intentionally so the persisted dir
survives until gstack-brain-sync moves it.

Adds test/gbrain-sync-skip.test.ts covering 5 SKIP scenarios (broken-db,
broken-config, no-cli, missing-config, ok pass-through). All 25
sync-related unit tests pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(gbrain): v1.34.0.0 migration notice + transcripts allowlist for artifacts pipeline

Per plan D5 + D11. Two pieces of the split-engine rollout:

1. gstack-upgrade/migrations/v1.34.0.0.sh — prints a one-time
   discoverability notice for existing Path 4 (remote-http MCP) users
   whose machine has no local engine yet. Tells them about /setup-gbrain
   Step 4.5 (the new local-PGLite opt-in). Silent for everyone else.
   User can suppress permanently via `gstack-config set
   local_code_index_offered true`. Touchfile at
   ~/.gstack/.migrations/v1.34.0.0.done makes it idempotent.

2. bin/gstack-artifacts-init — adds `transcripts/run-*/*.md` and
   `transcripts/run-*/**/*.md` to the managed allowlist so the
   gstack-memory-ingest persistent staging dir (used in remote-http
   mode per D11) gets pushed to the artifacts repo. Brain admin's
   pull job then indexes transcripts into the remote brain.
   Privacy class: behavioral (matches transcript content).

Adds test/gstack-upgrade-migration-v1_34_0_0.test.ts with 5 cases:
state match, no-MCP, local-config-present, opt-out, and idempotency.
All 5 pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* feat(gbrain): /setup-gbrain Step 1.5/4.5 + /sync-gbrain Step 1.5 templates

Per plan D4, D10, D11, D12. Wires the skill prose to the new
split-engine flow + classifier introduced in earlier commits.

setup-gbrain/SKILL.md.tmpl:
  - Step 1: detect output description now includes the v1.34.0.0
    gbrain_local_status field (5 values).
  - Step 1.5 (NEW): broken-db / broken-config remediation. AskUserQuestion
    with 4 options — Retry / Switch to PGLite / Switch brain mode / Quit
    (plan D4). Retry is recommended first since broken-db often = transient
    Postgres outage. PGLite is explicitly one-way + destructive (moves
    existing config to ~/.gbrain/config.json.gstack-bak-<ts>); rollback on
    init failure restores the .bak (plan D7).
  - Step 4d → Step 4.5 (NEW): in Path 4, after the verify step, offer
    local PGLite for code search. AskUserQuestion Yes/No (plan D10/D11).
    Yes path runs gstack-gbrain-install + `gbrain init --pglite --json`
    with the same rollback-safe sequence. No path skips Steps 3/4/5/7.5.
  - Step 10 verdict (Path 4): adds "Code search" row reflecting Step 4.5
    choice. Updates "Transcripts" row to describe the new D11 routing
    (artifacts repo → remote brain).

sync-gbrain/SKILL.md.tmpl:
  - Step 1 split-engine prose: corrects the prior misleading claim that
    "memory routes through whatever setup-gbrain configured, including
    remote-MCP" (codex finding #3). Memory stage shells out to local
    `gbrain import` in local-stdio mode; in remote-http mode it persists
    to ~/.gstack/transcripts/ for the artifacts pipeline.
  - Step 1.5 (NEW): local-engine pre-flight. STOP on no-cli, broken-config,
    broken-db. Soft skip (continue with code+memory SKIP) on
    missing-config + remote-http per plan D12. Surfaces actionable user
    remediation message instead of the orchestrator crashing two stages
    with ERR.

Regenerated SKILL.md for all hosts (claude, kiro, opencode, slate,
cursor, openclaw, hermes, gbrain). All 712 skill-validation + gen-skill-docs
tests pass.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(gbrain): .bak-rollback contract for Step 1.5 / 4.5 init failure path

Per plan D7 (rollback semantics) and codex #10 (rollback scope). The
/setup-gbrain skill instructs the model to follow a specific shell
sequence when running `gbrain init --pglite` against an existing
config:

  1. mv ~/.gbrain/config.json ~/.gbrain/config.json.gstack-bak-<ts>
  2. gbrain init --pglite --json
  3. on non-zero exit: mv .bak back; surface error

This test verifies that contract using a fake `gbrain` binary that
fails on init. Three cases:

  - FAILURE: gbrain init exits non-zero → broken config restored to
    original path, no leftover .bak.
  - SUCCESS: gbrain init exits 0 → new config in place, .bak survives
    for audit (user reviews + deletes manually).
  - SCOPE: any partial PGLite directory at ~/.gbrain/pglite/ is NOT
    auto-cleaned. We only promise to restore config.json; PGLite
    cleanup is the user's call (codex #10).

If the skill template rewrites this sequence in a future change, this
test should fail until the test's shell is updated too. That's the
point — keep the test and the skill template aligned.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(gbrain): periodic E2E for /setup-gbrain Path 4 + Step 4.5 Yes flow

End-to-end coverage of the new opt-in question via runAgentSdkTest.
Stubs the MCP endpoint at /tools/list with a 200 response carrying a
fake gbrain v0.32.3.0 serverInfo, and fakes the gbrain + claude CLIs
so init writes a PGLite config and mcp add succeeds. Asserts the model:

  1. invokes gstack-gbrain-install (Step 4.5 Yes branch)
  2. invokes `gbrain init --pglite --json`
  3. writes a working ~/.gbrain/config.json with engine=pglite
  4. registers the remote MCP via `claude mcp add --transport http`
  5. never leaks the bearer token to CLAUDE.md

Classified as periodic-tier per plan D6 (codex #12 flagged AgentSDK
flakiness; gate-tier coverage of the split-engine behavior lives in the
deterministic unit tests at gbrain-local-status.test.ts and
gbrain-sync-skip.test.ts). Touchfile fires the test when the skill
template, install/verify/init helpers, the local-status classifier, or
the agent-sdk-runner harness changes.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore(gbrain): bump migration to v1.35.0.0 after main merge

main shipped v1.34.0.0 (factory-export submodule) + v1.34.1.0 (update-check
hardening) while this branch was in flight. The migration file I named
v1.34.0.0.sh now belongs at v1.35.0.0 — the next minor on top of main,
matching the scale of split-engine work (new lib + orchestrator skip +
template overhaul + transcripts routing).

Renames the migration script and its test file; updates all internal
version references in both files. Behavior unchanged.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* perf(gbrain): memoize gbrain resolution + use --fast doctor in detect

Cuts detect's wall time substantially by sharing fork-exec results
between the helper that walks the JSON output and the localEngineStatus
classifier from lib/gbrain-local-status.ts.

Before: detect made 2x `command -v gbrain` calls (one in detect's
detectGbrain, one in the classifier's resolveGbrainBin) and 2x
`gbrain --version` calls. With memoization keyed on PATH, both
collapse to one fork each (~400ms saved per skill preamble).

Also adds `--fast` to the `gbrain doctor --json` call in detect so a
broken-db config (Garry's repro) doesn't burn a full 5s timeout on the
doctor's DB-connection check. The classifier still probes the DB
directly via `gbrain sources list --json` for engine reachability —
that's `gbrain_local_status`, separate from the coarse
`gbrain_doctor_ok` summary flag.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(gbrain): relax E2E assertions to smoke-test contract

Per codex #12 (AgentSDK harness is non-deterministic): the E2E now
asserts the model followed the split-engine path WITHOUT requiring a
specific subcommand sequence. Three assertions:

  1. AskUserQuestion was called (model reached interactive branches)
  2. At least one of {gstack-gbrain-install, `gbrain init --pglite`,
     `claude mcp add`} fired (model followed the skill, not a no-op)
  3. The fake bearer token never leaked to CLAUDE.md (security regression)

Deterministic per-step coverage of the same flow lives in the gate-tier
unit tests (gbrain-local-status, gbrain-sync-skip, init-rollback,
upgrade-migration). The E2E exists to catch the "model can't follow
the skill at all" regression class, not to pin the exact tool sequence.

Test passes in 280s against the live Agent SDK.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* test(version): bump CLI smoke-test timeout to 15s (flaky at 5s under load)

The gstack-next-version integration smoke test spawns a child process
that does git operations + sibling-worktree probing. Wall time hovers
4-5s on M-series Macs; flakes at exactly 5001-5002ms when the test
suite runs under load (bun's parallel scheduling). Bumping per-test
timeout to 15s eliminates the flake without changing test logic.

Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>

* chore: bump version and changelog (v1.37.0.0)

Co-Authored-By: Claude Opus 4.7 <noreply@anthropic.com>

---------

Co-authored-by: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
 2026-05-14 17:20:48 -07:00