diff --git a/frontend/src/app/main/data/plugins.cljs b/frontend/src/app/main/data/plugins.cljs
index a075e54a12..905908fa2b 100644
--- a/frontend/src/app/main/data/plugins.cljs
+++ b/frontend/src/app/main/data/plugins.cljs
@@ -44,6 +44,20 @@
     (update [_ state]
       (update-in state [:workspace-local :open-plugins] (fnil conj #{}) id))))
 
+(defn reset-plugin-flags
+  [id]
+  (ptk/reify ::reset-plugin-flags
+    ptk/UpdateEvent
+    (update [_ state]
+      (update-in state [:workspace-local :plugin-flags] assoc id {}))))
+
+(defn set-plugin-flag
+  [id key value]
+  (ptk/reify ::reset-plugin-flags
+    ptk/UpdateEvent
+    (update [_ state]
+      (update-in state [:workspace-local :plugin-flags id] assoc key value))))
+
 (defn remove-current-plugin
   [id]
   (ptk/reify ::remove-current-plugin
@@ -54,7 +68,9 @@
 (defn- load-plugin!
   [{:keys [plugin-id name description host code icon permissions]}]
   (try
-    (st/emit! (save-current-plugin plugin-id))
+    (st/emit! (save-current-plugin plugin-id)
+              (reset-plugin-flags plugin-id))
+
     (.ɵloadPlugin
      ^js ug/global
      #js {:pluginId plugin-id
diff --git a/frontend/src/app/plugins/api.cljs b/frontend/src/app/plugins/api.cljs
index be97f52a78..cd4cfff542 100644
--- a/frontend/src/app/plugins/api.cljs
+++ b/frontend/src/app/plugins/api.cljs
@@ -32,6 +32,7 @@
    [app.main.ui.shapes.text.fontfaces :refer [shapes->fonts]]
    [app.plugins.events :as events]
    [app.plugins.file :as file]
+   [app.plugins.flags :as flags]
    [app.plugins.fonts :as fonts]
    [app.plugins.format :as format]
    [app.plugins.history :as history]
@@ -124,6 +125,9 @@
     :fonts
     {:get (fn [] (fonts/fonts-subcontext plugin-id))}
 
+    :flags
+    {:get (fn [] (flags/flags-proxy plugin-id))}
+
     :library
     {:get (fn [] (library/library-subcontext plugin-id))}
 
diff --git a/frontend/src/app/plugins/flags.cljs b/frontend/src/app/plugins/flags.cljs
new file mode 100644
index 0000000000..0e8a10a5da
--- /dev/null
+++ b/frontend/src/app/plugins/flags.cljs
@@ -0,0 +1,33 @@
+;; This Source Code Form is subject to the terms of the Mozilla Public
+;; License, v. 2.0. If a copy of the MPL was not distributed with this
+;; file, You can obtain one at http://mozilla.org/MPL/2.0/.
+;;
+;; Copyright (c) KALEIDOS INC
+
+(ns app.plugins.flags
+  (:require
+   [app.main.data.plugins :as dp]
+   [app.main.store :as st]
+   [app.plugins.utils :as u]
+   [app.util.object :as obj]))
+
+(defn flags-proxy
+  [plugin-id]
+  (obj/reify {:name "FlagProxy"}
+    :naturalChildOrdering
+    {:this false
+     :get
+     (fn []
+       (boolean
+        (get-in
+         @st/state
+         [:workspace-local :plugin-flags plugin-id :natural-child-ordering])))
+
+     :set
+     (fn [value]
+       (cond
+         (not (boolean? value))
+         (u/display-not-valid :naturalChildOrdering value)
+
+         :else
+         (st/emit! (dp/set-plugin-flag plugin-id :natural-child-ordering value))))}))
diff --git a/frontend/src/app/plugins/shape.cljs b/frontend/src/app/plugins/shape.cljs
index ec39712420..e85efe6115 100644
--- a/frontend/src/app/plugins/shape.cljs
+++ b/frontend/src/app/plugins/shape.cljs
@@ -52,6 +52,7 @@
    [app.plugins.parser :as parser]
    [app.plugins.register :as r]
    [app.plugins.ruler-guides :as rg]
+   [app.plugins.state :refer [natural-child-ordering?]]
    [app.plugins.text :as text]
    [app.plugins.utils :as u]
    [app.util.http :as http]
@@ -921,7 +922,6 @@
            (fn []
              (let [shape (u/locate-shape file-id page-id id)]
                (cond
-
                  (and (not (cfh/frame-shape? shape))
                       (not (cfh/group-shape? shape))
                       (not (cfh/svg-raw-shape? shape))
@@ -929,9 +929,14 @@
                  (u/display-not-valid :getChildren (:type shape))
 
                  :else
-                 (->> (u/locate-shape file-id page-id id)
-                      (:shapes)
-                      (format/format-array #(shape-proxy plugin-id file-id page-id %))))))
+                 (let [is-reversed? (ctl/flex-layout? shape)
+                       reverse-fn
+                       (if (and (natural-child-ordering? plugin-id) is-reversed?)
+                         reverse identity)]
+                   (->> (u/locate-shape file-id page-id id)
+                        (:shapes)
+                        (reverse-fn)
+                        (format/format-array #(shape-proxy plugin-id file-id page-id %)))))))
 
            :appendChild
            (fn [child]
@@ -950,8 +955,10 @@
                  (u/display-not-valid :appendChild "Plugin doesn't have 'content:write' permission")
 
                  :else
-                 (let [child-id (obj/get child "$id")]
-                   (st/emit! (dwsh/relocate-shapes #{child-id} id 0))))))
+                 (let [child-id (obj/get child "$id")
+                       is-reversed? (ctl/flex-layout? shape)
+                       index (if (and (natural-child-ordering? plugin-id) is-reversed?) 0 (count (:shapes shape)))]
+                   (st/emit! (dwsh/relocate-shapes #{child-id} id index))))))
 
            :insertChild
            (fn [index child]
@@ -970,7 +977,12 @@
                  (u/display-not-valid :insertChild "Plugin doesn't have 'content:write' permission")
 
                  :else
-                 (let [child-id (obj/get child "$id")]
+                 (let [child-id (obj/get child "$id")
+                       is-reversed? (ctl/flex-layout? shape)
+                       index
+                       (if (and (natural-child-ordering? plugin-id) is-reversed?)
+                         (- (count (:shapes shape)) index)
+                         index)]
                    (st/emit! (dwsh/relocate-shapes #{child-id} id index))))))
 
            ;; Only for frames
@@ -1360,7 +1372,8 @@
                  (let [shape (u/proxy->shape self)
                        file-id (obj/get self "$file")
                        page-id (obj/get self "$page")
-                       ids (->> children (map #(obj/get % "$id")))]
+                       reverse-fn (if (natural-child-ordering? plugin-id) reverse identity)
+                       ids (->> children reverse-fn (map #(obj/get % "$id")))]
 
                    (cond
                      (not= (set ids) (set (:shapes shape)))
diff --git a/frontend/src/app/plugins/state.cljs b/frontend/src/app/plugins/state.cljs
new file mode 100644
index 0000000000..25c931571f
--- /dev/null
+++ b/frontend/src/app/plugins/state.cljs
@@ -0,0 +1,16 @@
+;; This Source Code Form is subject to the terms of the Mozilla Public
+;; License, v. 2.0. If a copy of the MPL was not distributed with this
+;; file, You can obtain one at http://mozilla.org/MPL/2.0/.
+;;
+;; Copyright (c) KALEIDOS INC
+
+(ns app.plugins.state
+  (:require
+   [app.main.store :as st]))
+
+(defn natural-child-ordering?
+  [plugin-id]
+  (boolean
+   (get-in
+    @st/state
+    [:workspace-local :plugin-flags plugin-id :natural-child-ordering])))
diff --git a/plugins/CHANGELOG.md b/plugins/CHANGELOG.md
index e15c253923..a5d5faff84 100644
--- a/plugins/CHANGELOG.md
+++ b/plugins/CHANGELOG.md
@@ -1,6 +1,10 @@
+## 1.5.0 (Unreleased)
+
+- **plugin-types**: Added a flags subcontexts with the flag `naturalChildrenOrdering`
+
 ## 1.4.2 (2026-01-21)
 
-- **plugin-types:** fix atob/btoa functions
+- **plugin-runtime:** fix atob/btoa functions
 
 ## 1.4.0 (2026-01-21)
 
diff --git a/plugins/libs/plugin-types/index.d.ts b/plugins/libs/plugin-types/index.d.ts
index 9f85bc864a..ff56cb2490 100644
--- a/plugins/libs/plugin-types/index.d.ts
+++ b/plugins/libs/plugin-types/index.d.ts
@@ -804,6 +804,11 @@ export interface Context {
    */
   readonly viewport: Viewport;
 
+  /**
+   * Provides flags to customize the API behavior.
+   */
+  readonly flags: Flags;
+
   /**
    * Context encapsulating the history operations
    *
@@ -1679,6 +1684,19 @@ export interface Fill {
   fillImage?: ImageData;
 }
 
+/**
+ * This subcontext allows the API o change certain defaults
+ */
+export interface Flags {
+  /**
+   * If `true` the .children property will be always sorted in the z-index ordering.
+   * Also, appendChild method will be append the children in the top-most position.
+   * The insertchild method is changed acordingly to respect this ordering.
+   * Defaults to false
+   */
+  naturalChildOrdering: boolean;
+}
+
 /**
  * Represents a flexible layout configuration in Penpot.
  * This interface extends `CommonLayout` and includes properties for defining the direction,
diff --git a/plugins/libs/plugins-runtime/src/lib/api/index.ts b/plugins/libs/plugins-runtime/src/lib/api/index.ts
index 7ee49458f4..53cc8eceac 100644
--- a/plugins/libs/plugins-runtime/src/lib/api/index.ts
+++ b/plugins/libs/plugins-runtime/src/lib/api/index.ts
@@ -1,31 +1,32 @@
 import type {
-  Penpot,
-  EventsMap,
-  Page,
-  Shape,
-  Rectangle,
-  Board,
-  Group,
-  Viewport,
-  Text,
-  File,
-  Theme,
-  LibraryContext,
-  Ellipse,
-  Path,
-  BooleanType,
-  Boolean,
-  User,
   ActiveUser,
-  FontsContext,
-  SvgRaw,
+  Board,
+  Boolean,
+  BooleanType,
   Color,
   ColorShapeInfo,
+  Ellipse,
+  EventsMap,
+  File,
+  Flags,
+  FontsContext,
+  Group,
   HistoryContext,
-  LocalStorage,
-  VariantContainer,
   LibraryComponent,
+  LibraryContext,
   LibraryVariantComponent,
+  LocalStorage,
+  Page,
+  Path,
+  Penpot,
+  Rectangle,
+  Shape,
+  SvgRaw,
+  Text,
+  Theme,
+  User,
+  VariantContainer,
+  Viewport,
 } from '@penpot/plugin-types';
 
 import { Permissions } from '../models/manifest.model.js';
@@ -193,6 +194,10 @@ export function createApi(
       return plugin.context.fonts;
     },
 
+    get flags(): Flags {
+      return plugin.context.flags;
+    },
+
     get currentUser(): User {
       checkPermission('user:read');
       return plugin.context.currentUser;