diff --git a/.changes/fix-fs-write-sets-open.md b/.changes/fix-fs-write-sets-open.md
new file mode 100644
index 000000000..193aace47
--- /dev/null
+++ b/.changes/fix-fs-write-sets-open.md
@@ -0,0 +1,6 @@
+---
+fs: patch
+fs-js: patch
+---
+
+The `write-all` and `write-files` permissions (and so every `allow-*-write[-recursive]` set) are now sets of the `allow-*` command permissions, so they also allow the commands a command depends on. `writeFile` with a `ReadableStream` uses `open` and failed with "not allowed" under these sets.
diff --git a/plugins/fs/build.rs b/plugins/fs/build.rs
index 34b9475df..c77870f2d 100644
--- a/plugins/fs/build.rs
+++ b/plugins/fs/build.rs
@@ -77,35 +77,62 @@ const BASE_DIR_VARS: &[&str] = &[
     "APPCACHE",
     "APPLOG",
 ];
-const COMMANDS: &[(&str, &[&str])] = &[
-    ("mkdir", &[]),
-    ("create", &[]),
-    ("copy_file", &[]),
-    ("remove", &[]),
-    ("rename", &[]),
-    ("truncate", &[]),
-    ("ftruncate", &[]),
-    ("write", &[]),
-    ("write_file", &["open", "write"]),
-    ("write_text_file", &[]),
-    ("read_dir", &[]),
-    ("read_file", &[]),
-    ("read", &[]),
-    ("open", &[]),
-    ("read_text_file", &[]),
-    ("read_text_file_lines", &["read_text_file_lines_next"]),
-    ("read_text_file_lines_next", &[]),
-    ("seek", &[]),
-    ("stat", &[]),
-    ("lstat", &[]),
-    ("fstat", &[]),
-    ("exists", &[]),
-    ("watch", &[]),
+/// A command exposed by the plugin.
+struct Command {
+    name: &'static str,
+    /// Other commands the JS API calls when using this command,
+    /// e.g. `writeFile` with a stream uses `open` and `write`.
+    ///
+    /// The `allow-*` permission of this command also allows its dependencies,
+    /// and hand-written permissions that allow this command must allow them too.
+    dependencies: &'static [&'static str],
+}
+
+impl Command {
+    const fn new(name: &'static str) -> Self {
+        Self {
+            name,
+            dependencies: &[],
+        }
+    }
+
+    const fn dependencies(self, dependencies: &'static [&'static str]) -> Self {
+        Self {
+            name: self.name,
+            dependencies,
+        }
+    }
+}
+
+const COMMANDS: &[Command] = &[
+    Command::new("mkdir"),
+    Command::new("create"),
+    Command::new("copy_file"),
+    Command::new("remove"),
+    Command::new("rename"),
+    Command::new("truncate"),
+    Command::new("ftruncate"),
+    Command::new("write"),
+    Command::new("write_file").dependencies(&["open", "write"]),
+    Command::new("write_text_file"),
+    Command::new("read_dir"),
+    Command::new("read_file"),
+    Command::new("read"),
+    Command::new("open"),
+    Command::new("read_text_file"),
+    Command::new("read_text_file_lines").dependencies(&["read_text_file_lines_next"]),
+    Command::new("read_text_file_lines_next"),
+    Command::new("seek"),
+    Command::new("stat"),
+    Command::new("lstat"),
+    Command::new("fstat"),
+    Command::new("exists"),
+    Command::new("watch"),
     // TODO: Remove this in v3
-    ("unwatch", &[]),
-    ("size", &[]),
-    ("start_accessing_security_scoped_resource", &[]),
-    ("stop_accessing_security_scoped_resource", &[]),
+    Command::new("unwatch"),
+    Command::new("size"),
+    Command::new("start_accessing_security_scoped_resource"),
+    Command::new("stop_accessing_security_scoped_resource"),
 ];
 
 fn main() {
@@ -215,8 +242,8 @@ permissions = [
         &COMMANDS
             .iter()
             // FIXME: https://docs.rs/crate/tauri-plugin-fs/2.1.0/builds/1571296
-            .filter(|c| c.1.is_empty())
-            .map(|c| c.0)
+            .filter(|c| c.dependencies.is_empty())
+            .map(|c| c.name)
             .collect::<Vec<_>>(),
     )
     .global_api_script_path("./api-iife.js")
@@ -224,10 +251,16 @@ permissions = [
     .android_path("android")
     .build();
 
-    // workaround to include nested permissions as `tauri_plugin` doesn't support it
+    validate_command_dependencies(Path::new("permissions"));
+
+    // workaround to include command dependencies as `tauri_plugin` doesn't support it
     let permissions_dir = autogenerated.join("commands");
-    for (command, nested_commands) in COMMANDS {
-        if nested_commands.is_empty() {
+    for Command {
+        name: command,
+        dependencies,
+    } in COMMANDS
+    {
+        if dependencies.is_empty() {
             continue;
         }
 
@@ -244,11 +277,10 @@ permissions = [
             .iter_mut()
             .filter(|p| p.identifier.starts_with("allow"))
         {
-            for c in nested_commands.iter().map(|s| s.to_string()) {
-                if !p.commands.allow.contains(&c) {
-                    p.commands.allow.push(c);
-                }
-            }
+            p.commands.allow = std::iter::once(command)
+                .chain(dependencies.iter())
+                .map(|c| c.to_string())
+                .collect();
         }
 
         let out = toml::to_string_pretty(&permission_file)
@@ -267,3 +299,47 @@ permissions = [
         }
     }
 }
+
+/// Ensures every hand-written permission that allows a command also allows its dependencies.
+fn validate_command_dependencies(permissions_dir: &Path) {
+    let mut errors = Vec::new();
+
+    for entry in std::fs::read_dir(permissions_dir).expect("failed to read permissions dir") {
+        let path = entry.expect("failed to read permissions dir entry").path();
+        if path.extension().and_then(|ext| ext.to_str()) != Some("toml") {
+            continue;
+        }
+        println!("cargo:rerun-if-changed={}", path.display());
+
+        let content = std::fs::read_to_string(&path)
+            .unwrap_or_else(|e| panic!("failed to read {}: {e}", path.display()));
+        let permission_file = toml::from_str::<PermissionFile>(&content)
+            .unwrap_or_else(|e| panic!("failed to deserialize {}: {e}", path.display()));
+
+        for permission in &permission_file.permission {
+            let allowed = &permission.commands.allow;
+            for command in COMMANDS
+                .iter()
+                .filter(|c| allowed.iter().any(|a| a == c.name))
+            {
+                for dependency in command.dependencies {
+                    if !allowed.iter().any(|a| a == dependency) {
+                        errors.push(format!(
+                            "{}: `{}` allows `{}` but not its dependency `{dependency}`",
+                            path.display(),
+                            permission.identifier,
+                            command.name,
+                        ));
+                    }
+                }
+            }
+        }
+    }
+
+    if !errors.is_empty() {
+        panic!(
+            "permissions are missing command dependencies:\n{}",
+            errors.join("\n")
+        );
+    }
+}
diff --git a/plugins/fs/permissions/schemas/schema.json b/plugins/fs/permissions/schemas/schema.json
index c274b7c99..e14c6d043 100644
--- a/plugins/fs/permissions/schemas/schema.json
+++ b/plugins/fs/permissions/schemas/schema.json
@@ -2035,16 +2035,16 @@
           "markdownDescription": "An empty permission you can use to modify the global scope.\n\n## Example\n\n```json\n{\n  \"identifier\": \"read-documents\",\n  \"windows\": [\"main\"],\n  \"permissions\": [\n    \"fs:allow-read\",\n    {\n      \"identifier\": \"fs:scope\",\n      \"allow\": [\n        \"$APPDATA/documents/**/*\"\n      ],\n      \"deny\": [\n        \"$APPDATA/documents/secret.txt\"\n      ]\n    }\n  ]\n}\n```\n"
         },
         {
-          "description": "This enables all write related commands without any pre-configured accessible paths.",
+          "description": "This enables all write related commands without any pre-configured accessible paths.\n#### This permission set includes:\n\n- `allow-mkdir`\n- `allow-create`\n- `allow-copy-file`\n- `allow-remove`\n- `allow-rename`\n- `allow-truncate`\n- `allow-ftruncate`\n- `allow-write`\n- `allow-write-file`\n- `allow-write-text-file`",
           "type": "string",
           "const": "write-all",
-          "markdownDescription": "This enables all write related commands without any pre-configured accessible paths."
+          "markdownDescription": "This enables all write related commands without any pre-configured accessible paths.\n#### This permission set includes:\n\n- `allow-mkdir`\n- `allow-create`\n- `allow-copy-file`\n- `allow-remove`\n- `allow-rename`\n- `allow-truncate`\n- `allow-ftruncate`\n- `allow-write`\n- `allow-write-file`\n- `allow-write-text-file`"
         },
         {
-          "description": "This enables all file write related commands without any pre-configured accessible paths.",
+          "description": "This enables all file write related commands without any pre-configured accessible paths.\n#### This permission set includes:\n\n- `allow-create`\n- `allow-copy-file`\n- `allow-remove`\n- `allow-rename`\n- `allow-truncate`\n- `allow-ftruncate`\n- `allow-write`\n- `allow-write-file`\n- `allow-write-text-file`",
           "type": "string",
           "const": "write-files",
-          "markdownDescription": "This enables all file write related commands without any pre-configured accessible paths."
+          "markdownDescription": "This enables all file write related commands without any pre-configured accessible paths.\n#### This permission set includes:\n\n- `allow-create`\n- `allow-copy-file`\n- `allow-remove`\n- `allow-rename`\n- `allow-truncate`\n- `allow-ftruncate`\n- `allow-write`\n- `allow-write-file`\n- `allow-write-text-file`"
         }
       ]
     }
diff --git a/plugins/fs/permissions/write-all.toml b/plugins/fs/permissions/write-all.toml
index c18027825..bd354b1d1 100644
--- a/plugins/fs/permissions/write-all.toml
+++ b/plugins/fs/permissions/write-all.toml
@@ -1,17 +1,17 @@
 "$schema" = "schemas/schema.json"
 
-[[permission]]
+[[set]]
 identifier = "write-all"
 description = "This enables all write related commands without any pre-configured accessible paths."
-commands.allow = [
-  "mkdir",
-  "create",
-  "copy_file",
-  "remove",
-  "rename",
-  "truncate",
-  "ftruncate",
-  "write",
-  "write_file",
-  "write_text_file",
+permissions = [
+  "allow-mkdir",
+  "allow-create",
+  "allow-copy-file",
+  "allow-remove",
+  "allow-rename",
+  "allow-truncate",
+  "allow-ftruncate",
+  "allow-write",
+  "allow-write-file",
+  "allow-write-text-file",
 ]
diff --git a/plugins/fs/permissions/write-files.toml b/plugins/fs/permissions/write-files.toml
index 2d6aeffb1..434d84e0a 100644
--- a/plugins/fs/permissions/write-files.toml
+++ b/plugins/fs/permissions/write-files.toml
@@ -1,16 +1,16 @@
 "$schema" = "schemas/schema.json"
 
-[[permission]]
+[[set]]
 identifier = "write-files"
 description = "This enables all file write related commands without any pre-configured accessible paths."
-commands.allow = [
-  "create",
-  "copy_file",
-  "remove",
-  "rename",
-  "truncate",
-  "ftruncate",
-  "write",
-  "write_file",
-  "write_text_file",
+permissions = [
+  "allow-create",
+  "allow-copy-file",
+  "allow-remove",
+  "allow-rename",
+  "allow-truncate",
+  "allow-ftruncate",
+  "allow-write",
+  "allow-write-file",
+  "allow-write-text-file",
 ]